Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_H10
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077544-3|AAK39242.3|  458|Caenorhabditis elegans Hypothetical ...    36   0.048
AL032639-4|CAA21636.2|  858|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z81517-8|CAM84818.1|  357|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81093-3|CAB03147.1|  610|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AF036706-7|AAK39282.1|  562|Caenorhabditis elegans Hypothetical ...    28   9.6  

>AF077544-3|AAK39242.3|  458|Caenorhabditis elegans Hypothetical
           protein H22K11.4a protein.
          Length = 458

 Score = 35.5 bits (78), Expect = 0.048
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 342 RFHASLLGKPELPQWLHYIYSGRHHSGFIFGTPPRGTEGPLTLEVIG--LNRQDFETRRV 515
           ++ A+L  KP LP WL  + S      ++ GTP    +  +TL VI   L+  D + R V
Sbjct: 54  KWEATLNKKPALPNWLRLLPSRHPEIAYLIGTPVTNVQ-HVTLHVIAKRLDNFDIQQRMV 112

Query: 516 LLTL 527
           ++ L
Sbjct: 113 VINL 116


>AL032639-4|CAA21636.2|  858|Caenorhabditis elegans Hypothetical
           protein Y38F1A.3 protein.
          Length = 858

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = +3

Query: 261 AVETEMFAIPISPNLFNWTYQEFDQQYRFHASLLGKPELPQWLHYIYSGRH 413
           A  T M+ +P  P +    +   + +YR+        E  +W H++  G H
Sbjct: 528 AASTHMWLLPYLPYVGEQEHGSIEFKYRYLPEFFKLTEFRRWSHFVNLGNH 578


>Z81517-8|CAM84818.1|  357|Caenorhabditis elegans Hypothetical
           protein F28B1.9 protein.
          Length = 357

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 155 YFISIKEQDTGDHNGKRTAVFG 220
           YF ++K QD   H G  TAVFG
Sbjct: 232 YFANLKLQDVSMHCGTNTAVFG 253


>Z81093-3|CAB03147.1|  610|Caenorhabditis elegans Hypothetical
           protein F58D2.2 protein.
          Length = 610

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -3

Query: 234 TLLAKPNTAVRLPLWSPVSCSLILMKY*FLFNDAATSVLSFTPRPFEVKQ 85
           TLL  P T  ++P W P +   + +K  F F++  + ++   P  FE K+
Sbjct: 210 TLLETPETFAQVPRWLPANEDRLNLKSLF-FSNEKSEIVERVPFVFESKK 258


>AF036706-7|AAK39282.1|  562|Caenorhabditis elegans Hypothetical
           protein T07A9.10 protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 470 QR*RSFGASGWGTEYEARVMSPTVDIVKPL 381
           Q+ + FG  G GT+ E  V+  + D+V PL
Sbjct: 198 QKLKEFGNEGMGTDAELVVLDRSFDLVSPL 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,805,362
Number of Sequences: 27780
Number of extensions: 301372
Number of successful extensions: 691
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)