Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_H08
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...   263   1e-70
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609...   260   1e-69
01_05_0127 - 18401461-18401464,18401868-18403876,18404060-184042...    32   0.61 
03_02_0792 + 11236785-11237337,11237711-11238261,11238446-112386...    31   1.4  
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    29   5.7  
09_06_0103 + 20873310-20873382,20873530-20873735                       29   5.7  
05_06_0209 - 26389902-26389928,26389981-26390161,26390265-263904...    29   5.7  
08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497     28   7.5  
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119...    28   7.5  
06_03_0543 + 21967787-21970261                                         28   7.5  
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561...    28   7.5  
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308...    28   7.5  
04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727     28   9.9  
01_07_0027 - 40578075-40578437,40578647-40578767,40578852-405789...    28   9.9  
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581...    28   9.9  
01_05_0535 - 23001864-23005052                                         28   9.9  

>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score =  263 bits (644), Expect = 1e-70
 Identities = 123/205 (60%), Positives = 154/205 (75%)
 Frame = +3

Query: 57  ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 236
           ++A   G    L+  E+DV  MLAA  HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1   MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60

Query: 237 KLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAF 416
           KL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA  IAGR TPG FTNQ+Q +F
Sbjct: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120

Query: 417 REPRLLIVLDPAQDHQPITEASYVNIPVIALRNTDSPLRFVDIAIPCNTKSSHSIGLMWW 596
            EPRLLI+ DP  DHQPI E++  NIP IA  +TDSP+R+VDI IP N K  +SIG ++W
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFW 180

Query: 597 LLAREVLRLRGVLPRDQRWDVVVDL 671
           LLAR VL++RG +    +WDV+VDL
Sbjct: 181 LLARMVLQMRGTILPGHKWDVMVDL 205


>07_03_1272 -
           25360180-25360286,25360454-25360658,25360748-25360945,
           25361034-25361296,25361865-25362009
          Length = 305

 Score =  260 bits (636), Expect = 1e-69
 Identities = 120/194 (61%), Positives = 148/194 (76%)
 Frame = +3

Query: 90  LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 269
           L+  E+D+  MLAA  HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12  LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71

Query: 270 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 449
           IENP D+ V S+RP+GQRAVLKFA +TGA  IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72  IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131

Query: 450 AQDHQPITEASYVNIPVIALRNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 629
             DHQPI E++  NIP IA  +TDSP+R+VDI IP N K   SIG ++WLLAR VL++RG
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191

Query: 630 VLPRDQRWDVVVDL 671
            +    +WDV+VDL
Sbjct: 192 TILPGHKWDVMVDL 205


>01_05_0127 -
           18401461-18401464,18401868-18403876,18404060-18404237,
           18404381-18404958,18405609-18405611
          Length = 923

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
 Frame = +3

Query: 510 RNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR----EVLRLRGVLP-RDQRWDVVVDLS 674
           RN+D  L+F+ I   C  K +   G  W+        E L+   VL  RD  WD ++  S
Sbjct: 249 RNSDENLKFILID-GCLNKDADLTG-EWYHEQNGKQWEFLQSLWVLDIRDTNWDWILSPS 306

Query: 675 STVTLKKVKRMNXKPRNRLWYQLXXXXCSCP*KLE 779
             V + +++ +  K   R W+       SC  KL+
Sbjct: 307 KVVLMVELRELYLKATGRSWHDQIFLDMSCLSKLQ 341


>03_02_0792 +
           11236785-11237337,11237711-11238261,11238446-11238628,
           11238768-11238966,11239055-11239761
          Length = 730

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +3

Query: 345 HTGATPIAGRFTPGAFTNQIQAAFREPRLLI--VLDPAQDHQPITEASYVNIPVIALRNT 518
           HT +T    R TP AF +   AA  E R+ +  +   ++      EA Y +I V  +R+ 
Sbjct: 270 HTLSTGETVRVTPAAFDSVTPAAIDETRVAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSP 329

Query: 519 DSPLR 533
           + P++
Sbjct: 330 EQPMQ 334


>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
            23812210-23812285,23813064-23813072,23813243-23813335,
            23813578-23813581,23813780-23814703,23814926-23815909,
            23816073-23816118,23816376-23816951,23817253-23817798,
            23817820-23818416
          Length = 2252

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 157  TFSAPRWVVAASILVTSSSLRASTSNP 77
            TF A RWV+AA   V  + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126


>09_06_0103 + 20873310-20873382,20873530-20873735
          Length = 92

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +2

Query: 335 VCRAHRCYAYC---GTFHTRCFY*PDPSCIP*TSSLDCI 442
           +CR+ RC  YC   G    RC +  DPS     ++ +C+
Sbjct: 45  LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83


>05_06_0209 -
           26389902-26389928,26389981-26390161,26390265-26390407,
           26390480-26390588,26390839-26391023,26391428-26392082,
           26392392-26392496,26392757-26392844,26392885-26392947,
           26393451-26393513,26394328-26394484
          Length = 591

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = +3

Query: 360 PIAGRFTPGAFTNQIQAAFREPRLLIVLD---PAQDHQPITEASYVNIPVIALRNTDSPL 530
           P +GR TP A+ ++I +  +  RL+          DH+P+T     ++ V+  R     L
Sbjct: 514 PKSGRRTP-AWCDRILSRGKGIRLISYRRGELKLSDHRPVTAVFMADVEVLCHRKLQKAL 572

Query: 531 RFVDIAIPCNTKSSHSIG 584
            F D  +  +  SS + G
Sbjct: 573 TFTDAEVEYHLASSSAEG 590


>08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497
          Length = 369

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -1

Query: 689 QGHGRRQINHNIPALVTGKHTTKPQHFTCQQP-PHQTNRV 573
           +GHG+R   H +   V   H +  Q  T Q P PH+ N V
Sbjct: 193 EGHGQRAPPHLVRLHVPQSHPSDAQCLTAQPPDPHRRNVV 232


>08_01_0152 -
           1190358-1190462,1190648-1190765,1191134-1192691,
           1193338-1193530
          Length = 657

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -3

Query: 339 QTSVQHADRRAVMR*RTHQRGSRWLRQHEQPEQVFPRYDAS*SHGYHQHVVC 184
           + SV + D+  ++  RT  RGS  L    QPE + PRY+       H   VC
Sbjct: 269 KNSVNNDDKPMLVSIRTKGRGSSTLPSIAQPEPL-PRYNKHWRRKAHSMCVC 319


>06_03_0543 + 21967787-21970261
          Length = 824

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +3

Query: 585 LMWWLLAREVLRLRGVLPRDQRWDVVVDLSSTVTLKKVKRMNXKPRNRL 731
           L W++L RE  +LRGV P +  ++++ +     T +++     K ++ L
Sbjct: 472 LGWFILRREAKQLRGVWPAEAGYEMIANHFRRYTYRELVLATRKFKDEL 520


>01_06_0902 +
           32853708-32853739,32854787-32855596,32856094-32856157,
           32856375-32856446
          Length = 325

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +2

Query: 164 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 271
           P   +C+ T C    C        K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300


>01_01_0409 -
           3084821-3084988,3085069-3085155,3085270-3085476,
           3085904-3085985,3086085-3086275,3086410-3086616,
           3086709-3086871,3087905-3087960,3088035-3088148,
           3088599-3089807
          Length = 827

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 22/78 (28%), Positives = 27/78 (34%)
 Frame = +2

Query: 110 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*C 289
           CH   C   P  GR+   P G     +      CD  A+  G TC     C  H+ P  C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378

Query: 290 VRHLITALRSACCTEVCR 343
            R           T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396


>04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727
          Length = 706

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +2

Query: 167 DGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*CVRHLITALRSACCTEVCRA 346
           DG    Q+ C +  C  L+  +  +CSG  CC++   PR    + +T  +    +++ R 
Sbjct: 153 DGGTGYQSGC-FSQCRDLSGLVDGSCSGMGCCQT-TIPRGMYYYNVTFDKRFNTSQISRF 210

Query: 347 HRC 355
            RC
Sbjct: 211 GRC 213


>01_07_0027 -
           40578075-40578437,40578647-40578767,40578852-40578952,
           40579176-40579451,40579485-40579805,40581609-40581623,
           40581969-40582295,40583287-40583538
          Length = 591

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 683 HGRRQINHNIPALVTGKHTTKPQHFTCQQPPHQTNRVG 570
           + + Q   NIP LVT   TTK + F    PPH    +G
Sbjct: 463 NNKPQAKPNIPRLVTSTSTTKLERF---PPPHLDASIG 497


>01_06_0575 -
           30357556-30357582,30357698-30357944,30358039-30358161,
           30358275-30358301,30358475-30358633,30359764-30359948,
           30360225-30360293,30360432-30362354,30363018-30363339,
           30363506-30363543
          Length = 1039

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 200 WYPCDQLASYLGKTCSGCSCCRSHREP 280
           ++PC      +GKT S C   + HR P
Sbjct: 615 YHPCQPTVRLMGKTVSVCERSKEHRVP 641


>01_05_0535 - 23001864-23005052
          Length = 1062

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +3

Query: 534 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLSSTV-TLKKV---- 698
           FV +   C+       GL ++    E++   G+LPR + +  V+DL      L K+    
Sbjct: 792 FVSVLSACSHAGLVERGLDYF----ELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYM 847

Query: 699 KRMNXKPRNRLW 734
           KRM  KP   +W
Sbjct: 848 KRMPMKPNTLIW 859


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,038,774
Number of Sequences: 37544
Number of extensions: 560968
Number of successful extensions: 1485
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)