Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_H01
         (779 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342...    29   4.1  
10_08_0063 + 14588177-14589343                                         29   5.5  
02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213     29   5.5  
05_03_0387 + 13396158-13396271,13396390-13396434,13397004-133976...    28   7.2  
12_02_0091 - 13498143-13498499,13499005-13499301                       28   9.6  

>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
            26834330-26834732,26834840-26835118,26835285-26835716,
            26836362-26836838,26837171-26837212,26837285-26837545,
            26837637-26838938,26839146-26839575,26839643-26840046,
            26840360-26840716,26840842-26841102,26841494-26842141,
            26842231-26842452,26842547-26842768,26842860-26843009,
            26843739-26844111,26844467-26844689,26845167-26845425,
            26845585-26845920,26846013-26846999,26848395-26849624,
            26849706-26849768,26849858-26849910,26849998-26850079,
            26850520-26850588,26851070-26851129,26851205-26851267,
            26851993-26852101,26852742-26852827,26853120-26853847,
            26854613-26854676
          Length = 3716

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +2

Query: 356  SLPKVVSDEGRGYSQLHEKHHEAGYDAYVTGLCFLAMHSHLANMRGDDTTRFLSITSPLI 535
            SL +V+S E R     H K   +  + +   L FLA   H   +RG  +T  L ++SP +
Sbjct: 969  SLVEVLSSENRQ----HAKAALSALNTFAETLLFLARMKHTGMLRGGPSTPML-VSSPSL 1023

Query: 536  KP 541
             P
Sbjct: 1024 NP 1025


>10_08_0063 + 14588177-14589343
          Length = 388

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 171 CTH*IISSSLYLQNTPSSKSLHTACSHIS 257
           CT  + + S YL+  P+ +SLH A  HI+
Sbjct: 52  CTFRVGTHSWYLEYYPNGRSLHNASDHIA 80


>02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213
          Length = 320

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 17  VKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKLVVGH 151
           ++SQ D  N D  + ERE +     +    VA  +S  + L+ GH
Sbjct: 187 LQSQLDSANRDLFESEREIQHLRKIIADHCVAEALSHDKPLLAGH 231


>05_03_0387 +
           13396158-13396271,13396390-13396434,13397004-13397632,
           13397727-13397874,13397971-13398147,13398527-13398595,
           13398699-13398788,13399000-13399158,13399663-13399753,
           13399917-13400008,13400009-13400233,13400394-13400585
          Length = 676

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 122 SESEKLVVGHNMLLDVMHTLNHFFQPLPAEYTQ 220
           S S+ L  G  + LDV+    H  QP P E TQ
Sbjct: 116 SLSKPLEKGKTLHLDVLTVFTHSVQPFPEEITQ 148


>12_02_0091 - 13498143-13498499,13499005-13499301
          Length = 217

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +2

Query: 284 PPFKDKVNSSILKHLLATLSAAPFSLPKVVSDEGRGYSQLHEKHHEAGYDA 436
           PP+    +S++L H L T +A PFS+P      G   ++   +   +G D+
Sbjct: 100 PPYS---SSTLLSHSLHTTAAPPFSMPPPHPRSGAAAARGRRRRGGSGVDS 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,521,948
Number of Sequences: 37544
Number of extensions: 349328
Number of successful extensions: 829
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)