Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_G20
(824 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 51 1e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 7e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 7e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 45 1e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 43 3e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 43 4e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 7e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 9e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 40 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 3e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.001
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 1.5
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 2.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.5
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 51.6 bits (118), Expect = 9e-09
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 9/157 (5%)
Frame = +1
Query: 91 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 249
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 250 VRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 423
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 424 VSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
+ G V + + + P D TC F
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 51.2 bits (117), Expect = 1e-08
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 282
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 283 IDKRLSWNAGEWGCGTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXI 453
+D+RL++ G+ + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 454 XRLDISTPISMXLDXRPXDMXTCTXXF 534
RL I M L+ P D C F
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQF 148
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.4 bits (110), Expect = 8e-08
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = +1
Query: 109 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 273
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 274 MNWIDKRLSWNAGEW-GCGTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 444
+ W L+W + E+ + V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 445 SXIXRLDISTPISMXLDXRPXDMXTCT 525
+ + P D+ CT
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCT 174
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 48.4 bits (110), Expect = 8e-08
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +1
Query: 187 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CGTWLVSSERLWR 360
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 361 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTX 528
PD+VL N A G+Y +R + + NG V + + ++ + P D TC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 529 XF 534
F
Sbjct: 168 KF 169
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 400 GDYALRARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
G Y V++NGS + + + + P D C F
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 197
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 400 GDYALRARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
G Y V++NGS + + + + P D C F
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 197
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
G Y V++NGS + + + + P D C F
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 129
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.6 bits (108), Expect = 1e-07
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 9/151 (5%)
Frame = +1
Query: 109 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 267
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 268 LQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 441
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 442 VSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
V + + ++ P D TC F
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKF 167
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
G Y V+++GS + + M + P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKF 129
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.8 bits (106), Expect = 2e-07
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
G Y V+++GS + + M + P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKF 129
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
G Y V+++GS + + + + P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 129
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
G Y V+++GS + + + + P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKF 129
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
G Y V+++GS + + + + P D C F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKF 129
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 7e-07
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCGTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIXRLDIST 474
W E+G L V S+ +WRPD+VL NA A +A + + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 475 PISMXLDXRPXDMXTCTXXF 534
+ ++ P D TC F
Sbjct: 152 SCEIDVEYFPFDEQTCVLKF 171
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.2 bits (102), Expect = 7e-07
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Frame = +1
Query: 88 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 252
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 253 RIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 426
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 427 SNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXF 534
NNG+ + + + + P D C F
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKF 166
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 44.8 bits (101), Expect = 1e-06
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Frame = +1
Query: 82 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 240
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 241 ESTVRIQADLQMNWIDKRLSWNAGEWG-CGTWLVSSERLWRPDVVLLNAA 387
T + ++ W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.4 bits (100), Expect = 1e-06
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 12/145 (8%)
Frame = +1
Query: 136 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 294
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 295 LSWNAGEWGCGTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIXR 459
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 460 LDISTPISMXLDXRPXDMXTCTXXF 534
+ + ++ P D +C F
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKF 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.0 bits (99), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCGTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 436 GSVSXIXRLDISTPISMXLDXRPXDMXTC 522
GS++ RL I+ M L P D C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.6 bits (98), Expect = 2e-06
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCGTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIXRLD 465
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 466 ISTPISMXLDXRPXDMXTC 522
+ S+ ++ P D+ TC
Sbjct: 149 YKSSCSIDVEFFPYDVQTC 167
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.2 bits (97), Expect = 3e-06
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 12/148 (8%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 294
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 295 LSWN--AGEWGCGTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIXR 459
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 460 LDISTPISMXLDXRPXDMXTCTXXFRXY 543
+ ++ M L P D C+ Y
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASY 181
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.7 bits (96), Expect = 4e-06
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCGTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 436 GSVSXIXRLDISTPISMXLDXRPXDMXTC 522
GS++ RL I+ M L P D C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 3/114 (2%)
Frame = +1
Query: 190 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCGTWLVSSERLWRPD 366
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 367 VVLLNAAATTAGDYALRAR--VSNNGSVSXIXRLDISTPISMXLDXRPXDMXTC 522
+L N A + VS+ G V + + + ++ P D C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.5 bits (93), Expect = 9e-06
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Frame = +1
Query: 124 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 288
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 289 KRLSWNAGEWGCGTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIXR 459
RLS+ + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 460 LDISTPISMXLDXRPXDMXTC 522
L I M L P D +C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 41.1 bits (92), Expect = 1e-05
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Frame = +1
Query: 112 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 279
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 280 WIDKRLSWNAGEW-GCGTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 447
W D LSW ++ G V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 448 XIXRLDISTPISMXLDXRPXDMXTCTXXF 534
+ + + P D C F
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINF 187
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.3 bits (90), Expect = 2e-05
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 12/148 (8%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 294
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 295 LSWN--AGEWGCGTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIXR 459
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 460 LDISTPISMXLDXRPXDMXTCTXXFRXY 543
+ ++ M L P D C+ Y
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASY 181
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 36.3 bits (80), Expect = 3e-04
Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = +1
Query: 229 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWLVSSERLWRPDVVLLNAAATTAGDY 408
I E I L W D+RL+++ E +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 409 ALR---ARVSNNGSVSXIXRLDISTPISMXLDXRPXDMXTCTXXFRXY 543
R R+S +GSV+ R + M L P D CT Y
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESY 182
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 34.3 bits (75), Expect = 0.001
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Frame = +1
Query: 280 WIDKRLSWNAGEWGCGTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 432
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 433 NGSVSXIXRLDISTPISMXLDXRPXDMXTC 522
+GS++ RL I+ M L P D C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.2 bits (50), Expect = 1.5
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Frame = +1
Query: 190 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWLVSS-----ER 351
++V+ + + N I + R+ ++ +WI+ RL + G V+ +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 352 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIXRLDISTPISMXLDXRPXDMX 516
LW+PD LNA + AL + S+ N +V R+ M P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 517 TC 522
C
Sbjct: 129 IC 130
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 340 TPAKCRSPTPLRSNSVVCRSNSFED 266
TP + ++ PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 333 PSAAAPLPCVPTQS 292
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +2
Query: 740 PPXPRRXXXXGVXXRXPPGGPXG 808
P P+R PPGGP G
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPPG 53
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,119
Number of Sequences: 438
Number of extensions: 3825
Number of successful extensions: 63
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -