Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_G17
         (831 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.86 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   1.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   1.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   8.0  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = +1

Query: 436 VLDPAQDHQPITEASYVNIPVIALCNTDPP 525
           ++DP ++++   E   + IP++   +  PP
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 507 VQHRPPTKICGHCYPMQHQVFPLYWFDVVVV 599
           V +RP TK     +P  ++++P Y+FD  V+
Sbjct: 148 VLYRPDTKYMK--FPAIYEIYPNYFFDSSVI 176


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 507 VQHRPPTKICGHCYPMQHQVFPLYWFDVVVV 599
           V +RP TK     +P  ++++P Y+FD  V+
Sbjct: 148 VLYRPDTKYMK--FPAIYEIYPNYFFDSSVI 176


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 670 TNQPQHPSAGHGXAHHEASTLH 605
           T  P H + GHG +H  A+  H
Sbjct: 411 TPGPHHHTMGHGHSHIHATPHH 432


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 507  VQHRPPTKICGHCYPMQHQVFP 572
            +QH PP   CG     Q Q  P
Sbjct: 1265 LQHAPPAYSCGTVSVPQQQQLP 1286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,160
Number of Sequences: 438
Number of extensions: 6442
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)