Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_G10
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U73825-1|AAB95090.1|  465|Homo sapiens Smad5 protein.                  30   9.1  
CR457424-1|CAG33705.1|  465|Homo sapiens MADH5 protein.                30   9.1  
BC009682-1|AAH09682.1|  465|Homo sapiens SMAD family member 5 pr...    30   9.1  
AF010601-1|AAB66353.1|  465|Homo sapiens SMAD5 protein.                30   9.1  
AF009744-1|AAB82655.1|  462|Homo sapiens Mad homolog protein.          30   9.1  
AF009678-1|AAB72180.1|  465|Homo sapiens Smad5 protein.                30   9.1  

>U73825-1|AAB95090.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 644
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


>CR457424-1|CAG33705.1|  465|Homo sapiens MADH5 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 644
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


>BC009682-1|AAH09682.1|  465|Homo sapiens SMAD family member 5
           protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 644
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


>AF010601-1|AAB66353.1|  465|Homo sapiens SMAD5 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 644
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


>AF009744-1|AAB82655.1|  462|Homo sapiens Mad homolog protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 644
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 163 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 190


>AF009678-1|AAB72180.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 644
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,650,718
Number of Sequences: 237096
Number of extensions: 2336981
Number of successful extensions: 5308
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5308
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)