Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_G05
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0183 - 21681673-21682524                                         33   0.22 
10_08_0996 - 22112020-22112859                                         31   1.5  

>03_05_0183 - 21681673-21682524
          Length = 283

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 588 SQAFIATLLFDPSMSALPIIAKQNRQALDCSPIKRERELGLNRRXTG 728
           SQAF A LL D + +A+P++  Q R A + +  + E E    RR TG
Sbjct: 229 SQAFSAVLLADANRAAIPVVVVQKRPAPE-TETETEEEPPRQRRRTG 274


>10_08_0996 - 22112020-22112859
          Length = 279

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +3

Query: 588 SQAFIATLLFDPSMSALPIIAKQNRQALDCSPIKRERELGLNRRXTG 728
           +QAF A LL D + +A P++  Q R A + +  + E E    RR TG
Sbjct: 225 AQAFSAVLLADANRTASPVVVVQKRAAPE-TETETEEEPPRQRRRTG 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,830,710
Number of Sequences: 37544
Number of extensions: 426578
Number of successful extensions: 820
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)