Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_F20
(811 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 3e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 46 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 5e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 5e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 7e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 9e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 9e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 41 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 39 5e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 39 5e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 6e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 37 3e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 6e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 35 8e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.005
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.005
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.005
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 30 0.022
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.12
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 7.7
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 47.2 bits (107), Expect = 2e-07
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +2
Query: 335 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 503 QTCTXKXGSXMHNSDEM 553
QTC K GS N D++
Sbjct: 163 QTCIMKFGSWTFNGDQV 179
Score = 23.8 bits (49), Expect = 1.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 175 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 321
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 493
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 494 NDMQTCTXKXGSXMHNSDEMD 556
D+QTC K GS ++ ++D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 3e-07
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 503 QTCTXKXGSXMHNSDEMD 556
QTC K GS ++ ++D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.4 bits (105), Expect = 3e-07
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 503 QTCTXKXGSXMHNSDEMD 556
QTC K GS ++ ++D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 46.4 bits (105), Expect = 3e-07
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 302 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 475
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 476 QLDNWPNDMQTCTXKXGSXMHNSDEMDXXIDKXIXSMADXTXVGCD 613
+ +P D QTC K GS ++ ++D + +M D +G D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID--LKHINQNMGDKVEIGID 191
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 45.6 bits (103), Expect = 5e-07
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 308 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 475
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 476 QLDNWPNDMQTCTXKXGSXMHNSDEMD 556
++ +P D Q+C K GS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.8 bits (101), Expect = 1e-06
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 496
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 497 DMQTCTXKXGSXMHNSDEMDXXIDK 571
D C GS +H+ +E++ +DK
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDK 203
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 42.3 bits (95), Expect = 5e-06
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ ++D
Sbjct: 160 QRCEMKFGSWTYDGFQLD 177
Score = 21.8 bits (44), Expect = 7.7
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +1
Query: 76 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 240
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 241 RILADLQMNWIDKRLSWNAGGMG 309
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.9 bits (94), Expect = 7e-06
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ +++D
Sbjct: 191 QHCDMKFGSWTYDGNQVD 208
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 124 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 288
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 289 WNAGGMG 309
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.9 bits (94), Expect = 7e-06
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ +++D
Sbjct: 191 QHCDMKFGSWTYDGNQVD 208
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 124 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 288
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 289 WNAGGMG 309
WN G
Sbjct: 118 WNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.5 bits (93), Expect = 9e-06
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ +++D
Sbjct: 123 QHCDMKFGSWTYDGNQVD 140
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 214 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 309
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.5 bits (93), Expect = 9e-06
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 335 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 505
ER+WRPD N + + R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 506 TCTXKXGS 529
+C GS
Sbjct: 175 SCPLILGS 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.1 bits (92), Expect = 1e-05
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 308 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 475
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 476 QLDNWPNDMQTCTXKXGSXMHNSDEMD 556
++ +P D QTC K GS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ +++D
Sbjct: 123 QHCDMKFGSWTYDGNQVD 140
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 214 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 309
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ +++D
Sbjct: 123 QHCDMKFGSWTYDGNQVD 140
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 214 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 309
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ +++D
Sbjct: 123 QHCDMKFGSWTYDGNQVD 140
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 214 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 309
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ +++D
Sbjct: 123 QHCDMKFGSWTYDGNQVD 140
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 214 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 309
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 503 QTCTXKXGSXMHNSDEMD 556
Q C K GS ++ +++D
Sbjct: 123 QHCDMKFGSWTYDGNQVD 140
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 214 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 309
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 38.7 bits (86), Expect = 6e-05
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPND 499
V R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 500 MQTCTXKXGSXMHNSDEMD 556
Q C K S ++ +++
Sbjct: 142 EQRCVLKWASWTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 36.7 bits (81), Expect = 3e-04
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 338 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 508
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 509 CTXKXGS 529
C + GS
Sbjct: 144 CPLQFGS 150
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 103 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 270
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 271 IDKRLSWNAG 300
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.5 bits (78), Expect = 6e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 332 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 502
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 503 QTCTXKXGS 529
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.1 bits (77), Expect = 8e-04
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +2
Query: 335 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 505
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 506 TCTXKXGSXMHNSDEMDXXIDKXIXSMAD 592
C + S H +DEM D + + D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWDPDVPLVVD 204
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.3 bits (75), Expect = 0.001
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 323 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 493
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 494 NDMQTCTXKXGSXMHNSDEM 553
D Q C+ + S +D++
Sbjct: 169 LDRQVCSLRMASYGWTTDDL 188
Score = 27.5 bits (58), Expect = 0.16
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Frame = +1
Query: 43 ILFWLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHL 204
+L L FLL + + + ++D++L YD E+ D VV + + +
Sbjct: 8 LLVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFV 67
Query: 205 RH-ANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHL 321
R + I + + + W+D+RL +N G L++L
Sbjct: 68 RSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.3 bits (75), Expect = 0.001
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 323 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 493
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 494 NDMQTCTXKXGSXMHNSDEM 553
D Q C+ + S +D++
Sbjct: 169 LDRQVCSLRMASYGWTTDDL 188
Score = 30.3 bits (65), Expect = 0.022
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Frame = +1
Query: 43 ILFWLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHL 204
+L L FLL + + + ++D++L YD E+ D +V + L +
Sbjct: 8 LLVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFV 67
Query: 205 RH-ANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHL 321
R A I + + + + W+D+RL +N G L++L
Sbjct: 68 RSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 341 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 511
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 512 TXKXGSXMHNSDEM 553
+ S H + ++
Sbjct: 147 SMMIESLSHTTQDL 160
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 97 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 261
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 262 MNWIDKRLSWNA 297
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 31.5 bits (68), Expect = 0.010
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +2
Query: 326 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDN--W 490
V S +W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 491 PNDMQTCTXKXGSXMHNSDEM 553
P D+ CT S H S+E+
Sbjct: 167 PYDILNCTIHIASWSHGSNEI 187
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.005
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 308 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 460
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 461 TPISMQLDNWPNDMQTC 511
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
Score = 23.4 bits (48), Expect = 2.5
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 103 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 270
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 271 IDKRLSW 291
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.005
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 308 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 460
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 461 TPISMQLDNWPNDMQTC 511
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
Score = 22.2 bits (45), Expect = 5.8
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 103 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 270
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 271 IDKRLSW 291
D RL++
Sbjct: 68 TDPRLAF 74
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.005
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 308 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 460
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 461 TPISMQLDNWPNDMQTC 511
M L +P D Q C
Sbjct: 75 ASCPMNLQYFPMDRQLC 91
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 30.3 bits (65), Expect = 0.022
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 341 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 511
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 512 TXKXGSXMHNSDEMDXXIDKXIXSMAD 592
S HN +M D+ +AD
Sbjct: 157 PLIFESWTHNVLDMVLYWDQEPIILAD 183
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.12
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 335 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 499
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 500 MQTCTXKXGSXMHNSDEM 553
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 7.7
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 157 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 333
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 334 ---GTLV 345
GTL+
Sbjct: 293 QPVGTLI 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,261
Number of Sequences: 438
Number of extensions: 4418
Number of successful extensions: 76
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -