Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_F19
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 199 2e-51
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 199 2e-51
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 199 2e-51
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 199 2e-51
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 199 2e-51
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 199 2e-51
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 46 2e-05
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 660 LAHTXMXLXXXXXXKXXIXEIXLXGGXIXDKXKWAQ 767
+AHT M + K + EI + GG I K WA+
Sbjct: 163 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAR 198
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 581 WQDELGXXSIXKDFXXMIRYCXVVXVIGPHSNEXVXXXTKXGSH 712
WQDE G I DF + +YC + VI H+ + + +H
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIA-HTQMKILRRRQKKAH 179
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 660 LAHTXMXLXXXXXXKXXIXEIXLXGGXIXDKXKWAQ 767
+AHT M + K + EI + GG I K WA+
Sbjct: 163 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAR 198
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 581 WQDELGXXSIXKDFXXMIRYCXVVXVIGPHSNEXVXXXTKXGSH 712
WQDE G I DF + +YC + VI H+ + + +H
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIA-HTQMKILRRRQKKAH 179
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 581 WQDELGXXSIXKDFXXMIRYCXVVXVI 661
WQDE G I DF + +YC + VI
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVI 163
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 660 LAHTXMXLXXXXXXKXXIXEIXLXGGXIXDKXKWAQ 767
+AHT M + K + EI + GG I K WA+
Sbjct: 163 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAR 198
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 581 WQDELGXXSIXKDFXXMIRYCXVVXVIGPHSNEXVXXXTKXGSH 712
WQDE G I DF + +YC + VI H+ + + +H
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIA-HTQMKILRRRQKKAH 179
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 581 WQDELGXXSIXKDFXXMIRYCXVVXVI 661
WQDE G I DF + +YC + VI
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVI 163
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 660 LAHTXMXLXXXXXXKXXIXEIXLXGGXIXDKXKWAQ 767
+AHT M + K + EI + GG I K WA+
Sbjct: 163 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAR 198
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 581 WQDELGXXSIXKDFXXMIRYCXVVXVIGPHSNEXVXXXTKXGSH 712
WQDE G I DF + +YC + VI H+ + + +H
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIA-HTQMKILRRRQKKAH 179
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 660 LAHTXMXLXXXXXXKXXIXEIXLXGGXIXDKXKWAQ 767
+AHT M + K + EI + GG I K WA+
Sbjct: 65 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAR 100
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 581 WQDELGXXSIXKDFXXMIRYCXVVXVIGPHSNEXVXXXTKXGSH 712
WQDE G I DF + +YC + VI H+ + + +H
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIA-HTQMKILRRRQKKAH 81
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 660 LAHTXMXLXXXXXXKXXIXEIXLXGGXIXDKXKWAQ 767
+AHT M + K + EI + GG I K WA+
Sbjct: 65 IAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAR 100
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 581 WQDELGXXSIXKDFXXMIRYCXVVXVIGPHSNEXVXXXTKXGSH 712
WQDE G I DF + +YC + VI H+ + + +H
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIA-HTQMKILRRRQKKAH 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,714,341
Number of Sequences: 27780
Number of extensions: 317034
Number of successful extensions: 714
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -