Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_F18
         (816 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   306   1e-83
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    64   9e-11
Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   7.0  
AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical ...    28   9.2  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  306 bits (751), Expect = 1e-83
 Identities = 136/201 (67%), Positives = 170/201 (84%)
 Frame = +3

Query: 99  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 278
           M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60

Query: 279 MRKAIKDHLDNNPXLEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 458
           +RKA++ HL  NP LEKLLPHI  NVGFVFT+ DL E+R KLLEN+  APA+ GAIAP  
Sbjct: 61  IRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120

Query: 459 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 638
           V +P  NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML +
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGV 180

Query: 639 SPFSYGLVVKQVYDSGTIFAP 701
           +PFSYGLVV+QVYD GT++ P
Sbjct: 181 TPFSYGLVVRQVYDDGTLYTP 201



 Score = 36.3 bits (80), Expect = 0.026
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 700 PEILDIKPEDXRAKFQXGIANVLXFXXXIGYPTMVXXPH 816
           PE+LD+  E+ R +F  G+ NV      + YPT+    H
Sbjct: 201 PEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAH 239


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
 Frame = +3

Query: 72  RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 251
           R    +L+++ ++ K T K+N   ++   +D+Y   FI    N+ S +   IR   + +S
Sbjct: 6   RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64

Query: 252 IVLMGKNTMMRKAI-KDHLDNNPX-LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 425
               GKN ++  A+ K   D     L K    +KG  G +FT     EV  +  E   + 
Sbjct: 65  RFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEED 124

Query: 426 PARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 602
            AR G +A  +VV+P    +          + L +PTK+ KG I +     + K G+ + 
Sbjct: 125 YARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLT 184

Query: 603 ASEATLLNMLNISPFSYGLVVK 668
             +A +L    +    + L+ K
Sbjct: 185 VEQAKILKHFEVKMSQFRLIFK 206


>Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical
           protein T06E6.10 protein.
          Length = 249

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/56 (23%), Positives = 20/56 (35%)
 Frame = +1

Query: 247 PVSCSWEKTQ*CAKPSKTTWTTIXPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 414
           P  C+  +   C      T   + P+  C H +  T   CSP +        C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 54  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 167
           L+ K   S ++ +SR+ +EDK +  SN+++K  QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 463 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 353
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical
           protein Y67D8B.2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 402 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 551
           +L   +Q  A   A+  L+  +P   TGL P +   FQAL  P  I+  T
Sbjct: 42  VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,660,384
Number of Sequences: 27780
Number of extensions: 423114
Number of successful extensions: 1181
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)