Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_E24
(866 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 68 1e-13
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 63 3e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 59 5e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 1e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 7e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 5e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 6e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 1e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 43 4e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 1e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.008
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 30 0.024
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 30 0.032
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.073
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.30
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.4
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 67.7 bits (158), Expect = 1e-13
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-DIRESESTVR 259
I SA C + D LL+ Y+R P S +VV L L L D+ + +
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 260 ILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVS 433
L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A +
Sbjct: 69 TNVWLEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILH 128
Query: 434 NNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
G V W + + + P D QTC KFGS
Sbjct: 129 YTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 63.3 bits (147), Expect = 3e-12
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRH-ADIRESESTVRILADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVXWI 457
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 458 KRLDISTPISMQLDNXPNDMQTCTFKFGS 544
RL I M L+N P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 9e-12
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----DIRESESTVRILADLQ 277
C + D LL+ Y++ P + LT+ ++ D+ + ++
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 278 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVX 451
+W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G V
Sbjct: 79 QSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 138
Query: 452 WIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
W + + ++ P D QTC KFGS
Sbjct: 139 WKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.5 bits (140), Expect = 2e-11
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHADIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVXWIKRLDIST 478
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 479 PISMQLDNXPNDMQTCTFKFGS 544
+ ++ P D QTC KFGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 60.5 bits (140), Expect = 2e-11
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-DIRESES 250
+C +A + + D LL+ Y+R P ++ V + L L D+
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 251 TVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL--- 418
+ ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIM 122
Query: 419 -RARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
+A + + G V W + + ++ P D QTC KFGS
Sbjct: 123 TKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 60.1 bits (139), Expect = 3e-11
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHADIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 364
K+ VN L ++ ++ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAATTAGDYALRAR----VSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTF 532
PD+VL N A G+Y +R + + NG V W+ + ++ + P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 533 KFGSRMHNXDK 565
KFGS N D+
Sbjct: 168 KFGSWTFNGDQ 178
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.1 bits (139), Expect = 3e-11
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-DIRESESTVRILADLQMNWIDKRLS 304
+++ LL++Y+ P + V + L+ D+ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVXWIKRLDIST 478
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 479 PISMQLDNXPNDMQTCTFKFGS 544
+ + P D Q C KFGS
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.1 bits (139), Expect = 3e-11
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-DIRESESTVRILADLQMNWIDKRLS 304
+++ LL++Y+ P + V + L+ D+ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVXWIKRLDIST 478
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 479 PISMQLDNXPNDMQTCTFKFGS 544
+ + P D Q C KFGS
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 230 DIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
G Y V++NGS ++ + + + P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 59.3 bits (137), Expect = 5e-11
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPPDSKIVVNLT--LHLRHADIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVXWIKRLD 469
WN E+G L V SE +W PD+VL N A G+Y + +A + G V W
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 470 ISTPISMQLDNXPNDMQTCTFKFGSRMHN 556
+ + ++ P D Q+C KFGS +N
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYN 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHADIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVXWIKRLD 469
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 470 ISTPISMQLDNXPNDMQTCTFKFGS 544
+ S+ ++ P D+QTC K GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 230 DIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
G Y V+++GS ++ + M + P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 230 DIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
G Y V+++GS ++ + M + P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 230 DIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
G Y V+++GS ++ + + + P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 57.2 bits (132), Expect = 2e-10
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-DIRESESTV 256
A+A++ + +++ LL TY+ E P ++ +V++ L L D+ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 430
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 431 SNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
NNG+ ++ + + + P D Q C KFGS
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 230 DIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
G Y V+++GS ++ + + + P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 230 DIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
G Y V+++GS ++ + + + P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 194 IVVNLTLHLRHADIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 370
+V L+LH D+ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAAATTAGDYALRARV--SNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
+L N A + V S+ G V W+ + + ++ P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.0 bits (119), Expect = 7e-09
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRH-ADIRESESTVRILADLQMNWID 292
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVXWIKR 463
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 464 LDISTPISMQLDNXPNDMQTCTFKFGS 544
L I M+L N P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.8 bits (111), Expect = 6e-08
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHADIRESESTVRILADLQMN 283
++ T+L + L YD P S +I N+T+ L + + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 284 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVX 451
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSV
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 452 WIKRLDISTPISMQLDNXPNDMQTCTFKFGSRMHNXDK 565
+ + + + P D C FGS +H+ ++
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEE 196
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.0 bits (104), Expect = 5e-07
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHADIRESESTVRILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L + + E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 287 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 439
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 440 GSVXWIKRLDISTPISMQLDNXPNDMQTCTFK---FGSRMHNXD-KWIPGXTKI 589
GS+ RL I+ M L P D Q C + FG M + KW G +
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSV 177
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.6 bits (103), Expect = 6e-07
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Frame = +2
Query: 140 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ADIRESESTVRILADLQMNWIDKR 298
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVXWIKR 463
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LDISTPISMQLDNXPNDMQTCTFKFGS 544
+ ++ M L P D Q C+ + S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-06
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 17/174 (9%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHADIRESESTVRILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L + + E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 287 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 439
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 440 GSVXWIKRLDISTPISMQLDNXPNDMQTCTFK---FGSRMHNXD-KWIPGXTKI 589
GS+ RL I+ M L P D Q C + FG M + KW G +
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQSV 177
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.7 bits (96), Expect = 4e-06
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Frame = +2
Query: 140 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ADIRESESTVRILADLQMNWIDKR 298
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVXWIKR 463
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LDISTPISMQLDNXPNDMQTCTFKFGS 544
+ ++ M L P D Q C+ + S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.5 bits (93), Expect = 1e-05
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Frame = +2
Query: 143 IDSLLATYDRESPPD---SKIVVNLTLHLRHAD-IRESESTVRILADLQMNWIDKRLSWN 310
I +L YD P+ ++V + L + D I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 311 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVXWIKRLDISTP 481
E + +E++W PD N + D R R+S +GSV + R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 482 ISMQLDNXPNDMQTCTFKFGS 544
M L P D Q CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 437 NGSVXWIKRLDISTPISMQLDNXPNDMQTCTFK---FGSRMHNXD-KWIPGXTKI 589
+GS+ RL I+ M L P D Q C + FG M + KW G +
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSV 116
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.003
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHADIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVX 451
W D RL + N ++ + + +W PD ++ R+ NG+V
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 WIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
++ R + +L+ P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.5 bits (73), Expect = 0.003
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHADIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVX 451
W D RL + N ++ + + +W PD ++ R+ NG+V
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 WIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
++ R + +L+ P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.5 bits (73), Expect = 0.003
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHADIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVX 451
W D RL + N ++ + + +W PD ++ R+ NG+V
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 WIKRLDISTPISMQLDNXPNDMQTCTFKFGS 544
++ R + +L+ P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.9 bits (69), Expect = 0.008
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Frame = +2
Query: 242 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 409
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 410 YALRAR---VSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFGSRMH 553
++ + ++ ++ ++ +L + +M+ ++ P+D Q C+ S H
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.3 bits (65), Expect = 0.024
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVXWIKRLDISTPISMQLDNXPNDMQ 520
+ +WRPD NA + T + + + ++ ++ +L + +M P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 521 TCTFKFGSRMHNXDKWI 571
C + S H D+ I
Sbjct: 176 ECKLQMESLSHTTDEMI 192
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 29.9 bits (64), Expect = 0.032
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 356 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTC 526
+W P V + N ++A T + + + +G V RL + ++L+ P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 527 TFKFGSRMHN 556
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 28.7 bits (61), Expect = 0.073
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHADIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 367
+ VN++ L L A ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 368 DV--VLLNAAATTAGDYALRARVSNNGSVXWIKRLDISTPISMQLDNXPNDMQTCTFKFG 541
D ++ R+ NG+V ++ R + +L+ P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 542 S 544
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.30
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVXWIKRLDISTPISMQLDNXPND 514
+ LW+PD LNA + AL + S+ N +V + R+ M+ P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 515 MQTCTFKFGSRMHNXDK 565
+Q C S ++ K
Sbjct: 127 IQICPIYIESFSYHKQK 143
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 337 PSAAAPFPCVPTQS 296
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,309
Number of Sequences: 438
Number of extensions: 6656
Number of successful extensions: 89
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -