Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_E14
(813 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.017
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.022
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 29 0.039
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.039
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.051
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.051
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.051
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.068
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.089
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 28 0.089
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 28 0.12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 26 0.48
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 7.8
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRARVSXNGSVSW 456
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 30.7 bits (66), Expect = 0.017
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRARVSXNGSVSW 456
V S+ +WRPD+VL NA A +A + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 30.3 bits (65), Expect = 0.022
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSXNGSVSW 456
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 29.5 bits (63), Expect = 0.039
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRAR----VSXNGSVSWI 459
+++W+PD+VL N A G+Y +R + + NG V W+
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.5 bits (63), Expect = 0.039
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 319 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSXNGSVSW 456
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.051
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
++ +LW+PD+++ N+A G Y V+ NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.051
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
++ +LW+PD+++ N+A G Y V+ NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 29.1 bits (62), Expect = 0.051
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSXNGSVSW 456
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.068
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
++ +LW+PD+++ N+A G Y V+ NGS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 28.3 bits (60), Expect = 0.089
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSXNGSVSW 456
G T V SE +W PD+VL N A G+Y + +A + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 0.089
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
+ RLW+PDV++ N+A G Y V NG+ ++
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSXNGSVSWI 459
V R+WRPD +L N A + VS G V W+
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
++ +LW+PD+++ N+A G Y V+ +GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
++ +LW+PD+++ N+A G Y V+ +GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
++ +LW+PD+++ N+A G Y V+ +GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
++ +LW+PD+++ N+A G Y V+ +GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSXNGSVSWI 459
++ +LW+PD+++ N+A G Y V+ +GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.8 bits (54), Expect = 0.48
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYAL---RARVSXNGSVSWIKRSDISTPXSMXLDNW 507
ER+WRPD N + + R+S +G + + R I M L N+
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNF 169
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 137 GQ*CCVFAFCHTSYSTSEEKPVTR 66
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,091
Number of Sequences: 438
Number of extensions: 3567
Number of successful extensions: 25
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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