Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_E05
         (842 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125992-1|BAC86381.1|  910|Homo sapiens protein ( Homo sapiens ...    30   9.1  

>AK125992-1|BAC86381.1|  910|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44004 fis, clone TESTI4023546, weakly  similar
           to Sialidase (EC 3.2.1.18). ).
          Length = 910

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = +2

Query: 296 PRPGRDGASTLQQTPSLDASSALRPFTSRXRFSXMQTGHPTTPCS---LRPF*RGTRELC 466
           P+P +   S+L   P     S LRP   + + S +    P T  S   L P   G   LC
Sbjct: 99  PQPPKTQVSSLHLEPPETGVSHLRPEPPKTQVSSLHLEPPETGVSHLYLEPSGTGVSHLC 158

Query: 467 PSP 475
           P P
Sbjct: 159 PEP 161


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,719,090
Number of Sequences: 237096
Number of extensions: 2047381
Number of successful extensions: 2628
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2628
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)