Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_E02
(819 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.007
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.012
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.037
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.085
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.79
SPBC1685.07c |||amino acid transporter |Schizosaccharomyces pomb... 29 1.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 5.6
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 26 5.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 5.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 7.4
SPBC12D12.06 |srb11||cyclin CycC|Schizosaccharomyces pombe|chr 2... 25 9.8
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 25 9.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.007
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Frame = +3
Query: 570 PPPXPPX------KXGPXPXGPPWGEXGXKKNPPSXSXXXKXPPPPPXXPPPXXXGXXFX 731
PPP PP P P PP G PP PPPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA---- 787
Query: 732 XGGXKXXXPXXXXXPPP 782
GG + P P P
Sbjct: 788 -GGSRYYAPAPQAEPEP 803
Score = 31.1 bits (67), Expect = 0.20
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 495 PXPXXGPIHCPQNXQTPXXFXXGXXPPPXPPXKXGPXPXGPP 620
P P PI P P G PPP PP G P PP
Sbjct: 742 PTPAPAPIPVPP----PAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.012
Identities = 26/70 (37%), Positives = 26/70 (37%)
Frame = -3
Query: 778 GGXXXXXGXXXFXPPXXXXXPXXXGGGXXGGGGGXFXXXLXEGGFFXXPXSPXGGPKGXG 599
GG G PP P G G GG GG GGF P GGP G G
Sbjct: 187 GGGFGGFGGGSGGPP-----PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
Query: 598 PXFXGGXGGG 569
GG GGG
Sbjct: 242 GG-PGGFGGG 250
Score = 34.3 bits (75), Expect = 0.021
Identities = 27/74 (36%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = -3
Query: 781 GGGXXXXXGXXXFXPPXXXXXPXXXGGGXXG---GGGGXFXXXLXEGGFFXXPXSPXGGP 611
GGG G PP G G G GG G F GGF P GGP
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG--PGGFEGGPGGFGGGP 244
Query: 610 KGXGPXFXGGXGGG 569
G G GG GGG
Sbjct: 245 GGFGGGL-GGFGGG 257
Score = 30.3 bits (65), Expect = 0.34
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = -3
Query: 796 PPPXXGG----GXXXXXGXXXFXPPXXXXXPXXXGGGXXGGGGGXFXXXLXEGGFFXXPX 629
PPP GG G G P GG G GGG GGF P
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Query: 628 SPXGGPKGXG 599
GGP G G
Sbjct: 260 GFGGGPGGHG 269
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 606 GXGPFXKGGXGGXXPPXXXXXGFGXFXGNG 517
G G F GG GG P GFG F G G
Sbjct: 189 GFGGFG-GGSGGPPPGPGGFGGFGGFGGEG 217
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -3
Query: 706 GGGXXGGGGGXFXXXLXEGGFFXXPXSPXGGPKGXGPXFXGGXGGGXXP 560
GGG G GG GGF GGP G F GG GG P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG----FGGGPGGHGGP 271
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.037
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
Frame = +3
Query: 570 PPPXP------PXKXGPXPXG--PPWGEXGXKKNPPSX-SXXXKXPPPPPXXPPP 707
PPP P P K P P PP K+PPS S PP PP PPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.085
Identities = 20/75 (26%), Positives = 21/75 (28%), Gaps = 1/75 (1%)
Frame = +3
Query: 570 PPPXPPXKXG-PXPXGPPWGEXGXKKNPPSXSXXXKXPPPPPXXPPPXXXGXXFXXGGXK 746
PP PP G P PP G PP + P PP PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 747 XXXPXXXXXPPPXXG 791
P PP G
Sbjct: 448 PLPPSAPIAPPLPAG 462
Score = 29.1 bits (62), Expect = 0.79
Identities = 18/68 (26%), Positives = 19/68 (27%)
Frame = +3
Query: 501 PXXGPIHCPQNXQTPXXFXXGXXPPPXPPXKXGPXPXGPPWGEXGXKKNPPSXSXXXKXP 680
P P+ TP PP PP P P G PPS P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Query: 681 PPPPXXPP 704
P PP
Sbjct: 461 AGMPAAPP 468
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +3
Query: 576 PXPPXKXGPXPXGPPWGEXGXKKNPP--SXSXXXKXPPPPPXXPP 704
P PP P PP + PP S S PP PP P
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 27.1 bits (57), Expect = 3.2
Identities = 22/85 (25%), Positives = 22/85 (25%), Gaps = 8/85 (9%)
Frame = +3
Query: 570 PPPXPPXKXGPXPXGPPWGEXGXKKNPPSXSXXX--------KXPPPPPXXPPPXXXGXX 725
PP PP P P PP S K PPPPP PP
Sbjct: 267 PPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPP--PPSRRNRGK 324
Query: 726 FXXGGXKXXXPXXXXXPPPXXGGGG 800
G PPP G
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAG 349
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 570 PPPXPPXKXGPXPXGPPWGEXGXKKNPPSXSXXXKXPPPPPXXPPP 707
PP PP P PP PP + PP PP P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIA-PPLPAGMPAAPPLPPAAPAP 476
Score = 25.4 bits (53), Expect = 9.8
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 9/59 (15%)
Frame = +3
Query: 570 PPPXPPXKXGPXPXGPPWGEXGXKKNPPSXSXXXKXPPPP---------PXXPPPXXXG 719
PPP P PP G PP + PPP P PPP G
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.79
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 582 PPXKXGPXPXGPPWGEXGXKKNPPSXSXXXKXPPPP 689
PP P P PP PP + PPPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 573 PPXPPXKXGPXPXGPPWGEXGXKKNPPSXSXXXKXPPPP 689
PP PP P P PP G PP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPM-PAGPPSAPPPPLPASSAPSVP 1744
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 573 PPXPPXKXGPXPXGPPWGEXGXKKNPPSXSXXXKXPPPPPXXPPP 707
PP P P P PP S PP PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC1685.07c |||amino acid transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 320 SSICANPGDRHIGRI*FCVHIINIHGRLKGCGLASV 427
S + + P D HIG+ F +IN+ + G G+ S+
Sbjct: 5 SPLSSGPADVHIGKAGFFSSVINLANTILGAGILSL 40
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +2
Query: 494 PXPXVXTXPLPXKXPNPXKXXXGGXXPPXPPXKXGPXPFXAPXGGXXXXKKPXLXKXXXK 673
P P V P+P P PP P G P P G P K
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 674 XPPPXXXXXPPP 709
P PPP
Sbjct: 1203 -PSVGVPPVPPP 1213
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +2
Query: 494 PXPXVXTXPLPXKXPNPXKXXXGGXXPPXPPXKXGPXPFXAPXGG 628
P P P+P P PP PP P P P G
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP-PVPTPSAG 1225
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 703 GGXXGGGGGXFXXXLXEGGFFXXPXSPXGGPKGXGPXFXGGXGG 572
GG G GG GGF GG +G GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -1
Query: 168 KAVILSPP*LNLSQFTDTQNYNPLTIIKFKKNISFSAHMITHRSRILPSLKCSN 7
KA +PP LN S+ ++ +N I + + I+HRSR L C N
Sbjct: 307 KARASTPPPLNFSRASEHRNEKGERISMINPRVVLDENGISHRSRYFIML-CDN 359
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 570 PPPXPPXKXGPXPXGPPWGEXGXKKNPPSXSXXXKXPPPPPXXPPP 707
PPP P K P N S + PPPP PPP
Sbjct: 909 PPPPLPVKTSLNTFSHP-DSVNIVANDTSVAGVMPAFPPPPPPPPP 953
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +3
Query: 570 PPPXPPXKX---GPXPXGPPWGEXGXKKNPPSXSXXXKXPPPPPXXPPP 707
PPP P P PP + G +PP+ S P P P P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNP 956
>SPBC12D12.06 |srb11||cyclin CycC|Schizosaccharomyces pombe|chr
2|||Manual
Length = 228
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 456 VGRGHVGTLCTLAKPHPLSLPWMLIIC 376
V + +LC +A PH L+ +LI C
Sbjct: 163 VNDSYASSLCLMAHPHQLAYAALLISC 189
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 25.4 bits (53), Expect = 9.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 125 NCDKFNHGGLKITAF 169
NCD FN G +IT+F
Sbjct: 689 NCDSFNEPGTEITSF 703
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,996,977
Number of Sequences: 5004
Number of extensions: 61635
Number of successful extensions: 226
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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