Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_E02
         (819 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   7.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.8  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 570 PPPXPPXKXGP 602
           PPP PP   GP
Sbjct: 343 PPPPPPSSSGP 353


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 361 DLVLRTYY*HPRQAQGMWL 417
           D+ L TYY   RQA   WL
Sbjct: 226 DIGLNTYYFFLRQAFPFWL 244


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 361 DLVLRTYY*HPRQAQGMWL 417
           D+ L TYY   RQA   WL
Sbjct: 226 DIGLNTYYFFLRQAFPFWL 244


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 332 HKSTTHHPTFQVQDGVH 282
           H+  T HP  Q Q G H
Sbjct: 170 HQMHTQHPHMQPQQGQH 186


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 13/47 (27%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
 Frame = +2

Query: 491 QPXPXVXTX-PLPXKXPNPXKXXXGGXXPPXPPXKXGPXPFXAPXGG 628
           QP P      P     PNP +    G  P  PP +       +P  G
Sbjct: 24  QPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASG 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,268
Number of Sequences: 438
Number of extensions: 7854
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)