Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_D18
         (854 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0917 - 22574472-22574558,22574756-22574821,22574848-225748...    31   0.89 
11_01_0411 - 3114959-3115000,3115504-3116703                           30   2.7  
04_03_0129 - 11554917-11555033,11555470-11555613,11555807-115559...    29   6.2  
05_05_0391 - 24617389-24617508,24617854-24617919,24618156-246182...    28   8.3  

>07_03_0917 -
           22574472-22574558,22574756-22574821,22574848-22574886,
           22574978-22575026,22575492-22575559,22575650-22575695,
           22575773-22575866,22575956-22576018,22576436-22576558,
           22577143-22577176,22577489-22577551,22577678-22577785,
           22577914-22577976,22578322-22578378
          Length = 319

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +1

Query: 130 VPHDRLAPXQRTSGSLPPY--SKIVVNLTLHLRHANIRESESTGRILADLQMNVDRQTTE 303
           +P+ R  P   ++  L P          T+ +   + ++ ++  + L   +  ++++  E
Sbjct: 39  MPNPRNVPSVSSNSRLSPLPPEPAAFGATVDIPLDSSKDLKNREKELQAREAELNKREKE 98

Query: 304 LERRANGAAELGLVSSERLWRPDVVLLNAGXT 399
           L+RR   AA  G+V  E+ W P + L++   T
Sbjct: 99  LKRREEAAARAGIVIEEKNWPPFLPLIHHDIT 130


>11_01_0411 - 3114959-3115000,3115504-3116703
          Length = 413

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = -2

Query: 391 PRLAVPRQASTSVPRTPAQVLQPHSPCVPTQSFVDPHSFEDLPVSARWTRT 239
           P L +PRQA+ +VP  PA  L   SP VP+   +    F    +  RW+ T
Sbjct: 264 PVLYLPRQAAPAVPCPPAPPLWLPSPSVPSSLALHVPLFHASSLE-RWSPT 313


>04_03_0129 -
           11554917-11555033,11555470-11555613,11555807-11555999,
           11556083-11556139,11556300-11556403,11556882-11556953,
           11557069-11557187,11557639-11557783,11558527-11558672,
           11558758-11558827,11559000-11559056,11559081-11559228,
           11559311-11559432,11559649-11559845,11560296-11560350,
           11560468-11560680,11561239-11561386,11561515-11561585,
           11563286-11563316,11563532-11563623,11565621-11565688,
           11567895-11568069
          Length = 847

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = -2

Query: 430 HXRGERSPRRWXHPRLAVPRQASTSVPRTPAQVLQPHSP--CVPTQSFVDPHSFE 272
           + +G+   R+W H RL +    +TS+P      L   SP    P + + D   FE
Sbjct: 27  YPKGQSRGRQWKHLRLLLQSSDATSLPPDRPNYLNIQSPPSIYPPKRYCDITGFE 81


>05_05_0391 -
           24617389-24617508,24617854-24617919,24618156-24618204,
           24618855-24618922,24619041-24619086,24619187-24619280,
           24619373-24619435,24619722-24619844,24620370-24620403,
           24621106-24621168,24621447-24621545,24622398-24622454
          Length = 293

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +1

Query: 262 LADLQMNVDRQTTELERRANGAAELGLVSSERLWRPDVVLLN 387
           L  ++  ++++  EL+R+   AA+ G+V  ++ W P   L++
Sbjct: 61  LQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIH 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,089,559
Number of Sequences: 37544
Number of extensions: 352418
Number of successful extensions: 864
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)