Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_D18
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37146-1|AAC50236.1| 1495|Homo sapiens silencing mediator of ret... 31 4.0
S83390-1|AAB50847.1| 769|Homo sapiens T3 receptor-associating c... 31 4.0
BC004326-1|AAH04326.1| 606|Homo sapiens Unknown (protein for IM... 31 4.0
AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein. 31 4.0
AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of r... 31 4.0
AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of r... 31 4.0
U83981-1|AAC25631.1| 674|Homo sapiens apoptosis associated prot... 30 9.3
CR457259-1|CAG33540.1| 674|Homo sapiens PPP1R15A protein. 30 9.3
BC003067-1|AAH03067.1| 674|Homo sapiens protein phosphatase 1, ... 30 9.3
AK001361-1|BAA91649.1| 674|Homo sapiens protein ( Homo sapiens ... 30 9.3
>U37146-1|AAC50236.1| 1495|Homo sapiens silencing mediator of retinoid
and thyroid hormone action protein.
Length = 1495
Score = 31.5 bits (68), Expect = 4.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -2
Query: 412 SPRRWXHPR-LAVPRQASTSVPRTPAQVLQPH----SPCVPTQSFVDPH 281
SP + PR L P ++ RTPA+ L PH P P S DPH
Sbjct: 952 SPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPH 1000
>S83390-1|AAB50847.1| 769|Homo sapiens T3 receptor-associating
cofactor-1 protein.
Length = 769
Score = 31.5 bits (68), Expect = 4.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -2
Query: 412 SPRRWXHPR-LAVPRQASTSVPRTPAQVLQPH----SPCVPTQSFVDPH 281
SP + PR L P ++ RTPA+ L PH P P S DPH
Sbjct: 272 SPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPH 320
>BC004326-1|AAH04326.1| 606|Homo sapiens Unknown (protein for
IMAGE:3629785) protein.
Length = 606
Score = 31.5 bits (68), Expect = 4.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -2
Query: 412 SPRRWXHPR-LAVPRQASTSVPRTPAQVLQPH----SPCVPTQSFVDPH 281
SP + PR L P ++ RTPA+ L PH P P S DPH
Sbjct: 63 SPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPH 111
>AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.
Length = 2461
Score = 31.5 bits (68), Expect = 4.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -2
Query: 412 SPRRWXHPR-LAVPRQASTSVPRTPAQVLQPH----SPCVPTQSFVDPH 281
SP + PR L P ++ RTPA+ L PH P P S DPH
Sbjct: 1964 SPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPH 2012
>AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor extended isofo
protein.
Length = 2507
Score = 31.5 bits (68), Expect = 4.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -2
Query: 412 SPRRWXHPR-LAVPRQASTSVPRTPAQVLQPH----SPCVPTQSFVDPH 281
SP + PR L P ++ RTPA+ L PH P P S DPH
Sbjct: 1964 SPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPH 2012
>AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor alpha protein.
Length = 2517
Score = 31.5 bits (68), Expect = 4.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -2
Query: 412 SPRRWXHPR-LAVPRQASTSVPRTPAQVLQPH----SPCVPTQSFVDPH 281
SP + PR L P ++ RTPA+ L PH P P S DPH
Sbjct: 1974 SPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPH 2022
>U83981-1|AAC25631.1| 674|Homo sapiens apoptosis associated protein
protein.
Length = 674
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 433 IHXRGERSPRRWXHPRLAVPRQASTSVPRTPAQVLQPHSP 314
I+ GE+ P W PRL + Q P TP P +P
Sbjct: 511 IYVPGEKPPPPWAPPRLPLRLQRRLKRPETPTHDPDPETP 550
>CR457259-1|CAG33540.1| 674|Homo sapiens PPP1R15A protein.
Length = 674
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 433 IHXRGERSPRRWXHPRLAVPRQASTSVPRTPAQVLQPHSP 314
I+ GE+ P W PRL + Q P TP P +P
Sbjct: 511 IYVPGEKPPPPWAPPRLPLRLQRRLKRPETPTHDPDPETP 550
>BC003067-1|AAH03067.1| 674|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 15A protein.
Length = 674
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 433 IHXRGERSPRRWXHPRLAVPRQASTSVPRTPAQVLQPHSP 314
I+ GE+ P W PRL + Q P TP P +P
Sbjct: 511 IYVPGEKPPPPWAPPRLPLRLQRRLKRPETPTHDPDPETP 550
>AK001361-1|BAA91649.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ10499 fis, clone NT2RP2000346, weakly similar to
MYELOID DIFFERENTIATION PRIMARY RESPONSE PROTEIN MYD116.
).
Length = 674
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 433 IHXRGERSPRRWXHPRLAVPRQASTSVPRTPAQVLQPHSP 314
I+ GE+ P W PRL + Q P TP P +P
Sbjct: 511 IYVPGEKPPPPWAPPRLPLRLQRRLKRPETPTHDPDPETP 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,034,350
Number of Sequences: 237096
Number of extensions: 2066031
Number of successful extensions: 4794
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4793
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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