Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_D18
(854 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274350-1|AAF81829.1| 871|Drosophila melanogaster DISCS LOST p... 37 0.041
AF132193-1|AAD34781.1| 871|Drosophila melanogaster unknown prot... 37 0.041
AF103942-1|AAD43031.1| 800|Drosophila melanogaster discs lost p... 37 0.041
AE014296-363|AAF47573.1| 871|Drosophila melanogaster CG12021-PC... 37 0.041
AE014296-362|AAG22224.1| 871|Drosophila melanogaster CG12021-PB... 37 0.041
AE014296-361|AAN11498.1| 871|Drosophila melanogaster CG12021-PA... 37 0.041
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 30 4.7
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 30 4.7
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 30 4.7
X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D. m... 29 8.1
M17211-1|AAA28417.1| 616|Drosophila melanogaster protein ( D.me... 29 8.1
AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p pro... 29 8.1
AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-P... 29 8.1
AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-P... 29 8.1
AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-P... 29 8.1
>AF274350-1|AAF81829.1| 871|Drosophila melanogaster DISCS LOST
protein.
Length = 871
Score = 36.7 bits (81), Expect = 0.041
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 394 HPRLAVPRQASTSVPRTPAQVLQPHSPCVPTQSFVDPHSFEDLPVS 257
H RL V R SVP TP L+P + VPT+ VDP E +S
Sbjct: 220 HVRLVVARPVEQSVP-TPQYALEPGTAVVPTRVLVDPAELERYLIS 264
>AF132193-1|AAD34781.1| 871|Drosophila melanogaster unknown
protein.
Length = 871
Score = 36.7 bits (81), Expect = 0.041
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 394 HPRLAVPRQASTSVPRTPAQVLQPHSPCVPTQSFVDPHSFEDLPVS 257
H RL V R SVP TP L+P + VPT+ VDP E +S
Sbjct: 220 HVRLVVARPVEQSVP-TPQYALEPGTAVVPTRVLVDPAELERYLIS 264
>AF103942-1|AAD43031.1| 800|Drosophila melanogaster discs lost
protein protein.
Length = 800
Score = 36.7 bits (81), Expect = 0.041
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 394 HPRLAVPRQASTSVPRTPAQVLQPHSPCVPTQSFVDPHSFEDLPVS 257
H RL V R SVP TP L+P + VPT+ VDP E +S
Sbjct: 149 HVRLVVARPVEQSVP-TPQYALEPGTAVVPTRVLVDPAELERYLIS 193
>AE014296-363|AAF47573.1| 871|Drosophila melanogaster CG12021-PC,
isoform C protein.
Length = 871
Score = 36.7 bits (81), Expect = 0.041
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 394 HPRLAVPRQASTSVPRTPAQVLQPHSPCVPTQSFVDPHSFEDLPVS 257
H RL V R SVP TP L+P + VPT+ VDP E +S
Sbjct: 220 HVRLVVARPVEQSVP-TPQYALEPGTAVVPTRVLVDPAELERYLIS 264
>AE014296-362|AAG22224.1| 871|Drosophila melanogaster CG12021-PB,
isoform B protein.
Length = 871
Score = 36.7 bits (81), Expect = 0.041
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 394 HPRLAVPRQASTSVPRTPAQVLQPHSPCVPTQSFVDPHSFEDLPVS 257
H RL V R SVP TP L+P + VPT+ VDP E +S
Sbjct: 220 HVRLVVARPVEQSVP-TPQYALEPGTAVVPTRVLVDPAELERYLIS 264
>AE014296-361|AAN11498.1| 871|Drosophila melanogaster CG12021-PA,
isoform A protein.
Length = 871
Score = 36.7 bits (81), Expect = 0.041
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 394 HPRLAVPRQASTSVPRTPAQVLQPHSPCVPTQSFVDPHSFEDLPVS 257
H RL V R SVP TP L+P + VPT+ VDP E +S
Sbjct: 220 HVRLVVARPVEQSVP-TPQYALEPGTAVVPTRVLVDPAELERYLIS 264
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 307 ERRANGAAELGLVSSERLWRPDVVLLN 387
E + G E+ V S+ +WRPD+VL N
Sbjct: 71 EPKEYGGVEMLHVPSDHIWRPDIVLYN 97
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 307 ERRANGAAELGLVSSERLWRPDVVLLN 387
E + G E+ V S+ +WRPD+VL N
Sbjct: 90 EPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 307 ERRANGAAELGLVSSERLWRPDVVLLN 387
E + G E+ V S+ +WRPD+VL N
Sbjct: 90 EPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D.
melanogaster adultShaker ShA mRNA for put. K(+)-channel.
).
Length = 616
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HLKICQYPPGGLG--LTNVSMSQMQGQV-DYDFGVRGETPART 160
H+ C Y PG LG L S+S+ + D D G+ TP T
Sbjct: 501 HVTSCSYLPGALGQHLKKSSLSESSSDIMDLDDGIDATTPGLT 543
>M17211-1|AAA28417.1| 616|Drosophila melanogaster protein (
D.melanogaster potassiumchannel (Shaker) mRNA, complete
cds. ).
Length = 616
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HLKICQYPPGGLG--LTNVSMSQMQGQV-DYDFGVRGETPART 160
H+ C Y PG LG L S+S+ + D D G+ TP T
Sbjct: 501 HVTSCSYLPGALGQHLKKSSLSESSSDIMDLDDGIDATTPGLT 543
>AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p
protein.
Length = 571
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HLKICQYPPGGLG--LTNVSMSQMQGQV-DYDFGVRGETPART 160
H+ C Y PG LG L S+S+ + D D G+ TP T
Sbjct: 456 HVTSCSYLPGALGQHLKKSSLSESSSDIMDLDDGIDATTPGLT 498
>AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-PG,
isoform G protein.
Length = 616
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HLKICQYPPGGLG--LTNVSMSQMQGQV-DYDFGVRGETPART 160
H+ C Y PG LG L S+S+ + D D G+ TP T
Sbjct: 501 HVTSCSYLPGALGQHLKKSSLSESSSDIMDLDDGIDATTPGLT 543
>AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-PB,
isoform B protein.
Length = 616
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HLKICQYPPGGLG--LTNVSMSQMQGQV-DYDFGVRGETPART 160
H+ C Y PG LG L S+S+ + D D G+ TP T
Sbjct: 501 HVTSCSYLPGALGQHLKKSSLSESSSDIMDLDDGIDATTPGLT 543
>AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-PD,
isoform D protein.
Length = 571
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 279 HLKICQYPPGGLG--LTNVSMSQMQGQV-DYDFGVRGETPART 160
H+ C Y PG LG L S+S+ + D D G+ TP T
Sbjct: 456 HVTSCSYLPGALGQHLKKSSLSESSSDIMDLDDGIDATTPGLT 498
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,500,429
Number of Sequences: 53049
Number of extensions: 575159
Number of successful extensions: 1651
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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