Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_D14
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.27
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.47
07_03_1747 + 29188568-29188715,29188793-29189541 31 1.4
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 1.9
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.3
03_01_0515 - 3864796-3865425 29 4.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.8
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 29 5.8
11_07_0003 - 27182551-27183054 28 7.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 7.7
09_02_0278 + 6691685-6692188 28 7.7
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 7.7
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 28 7.7
03_05_0267 - 22538631-22539452 28 7.7
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 7.7
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 7.7
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 28 7.7
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +2
Query: 644 RGGXPXRGXGXXVXPGXXPAGTRAWXAGPRVPPGXP-XXXAPGAAXPPPP 790
RGG P V P P GP PPG P PG PPP
Sbjct: 1170 RGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 321 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 157
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 374 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 526
PPP TT++ V L TA + S + QF+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 219 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 335
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 234 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 145
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +2
Query: 656 PXRGXGXXVXPGXXPAGTRAWXAGPRVPPGXPXXXAPGAAXPPPPXXNP 802
P G + P P + P +PP P P AA PPPP +P
Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPP----PPAASPPPPPPSP 106
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 665 GXGXXVXPGXXPAGTRAWXAGPRVPPGXPXXXAPGAAXPPPPXXNP 802
G G G P A A P PP P A GA PPP P
Sbjct: 311 GAGAGAGTGAPPPPP-AHPAAPAPPPPAPSPSAAGAGSGPPPPPPP 355
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 698 PAGTRAWXAGPRVPPGXPXXXAPGAAXPPPPXXNP 802
P RAW P PP P AP PP P P
Sbjct: 125 PQPPRAWDPSP--PPPPPAPAAPVLVPPPAPAPRP 157
>11_07_0003 - 27182551-27183054
Length = 167
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 801 GFXXGGGGXAAPGAXXXGXPGGTRGPAXQARVPAG 697
G GG G GA G PGG R P +PAG
Sbjct: 91 GSPGGGTGTTLAGA---GSPGGGRSPVGGGTIPAG 122
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 698 PAGTRAWXAGPRVPPGXPXXXAPGAAXPPPPXXNP 802
P+ T A P PP P P + PPPP P
Sbjct: 537 PSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPP 571
>09_02_0278 + 6691685-6692188
Length = 167
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 801 GFXXGGGGXAAPGAXXXGXPGGTRGPAXQARVPAG 697
G GG G GA G PGG R P +PAG
Sbjct: 91 GSPGGGTGTTLAGA---GSPGGGRSPVGGGTIPAG 122
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 106 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 261
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 680 VXPGXXPAGTRAWXAGPRVPPGXPXXXAPGAAXPPPP 790
+ PG A P PP P P A PPPP
Sbjct: 140 ILPGRQAASRAPSPPAPPSPPQDPAPSLPHAPAPPPP 176
>03_05_0267 - 22538631-22539452
Length = 273
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +2
Query: 635 GPXRGGXPXRGXGXXVXPGXXPAGTRAWXAGPRVPPGXPXXXAPGAAXPPPPXXNP 802
G GG G PA R W P PP P +P A PP +P
Sbjct: 154 GDGSGGGELGGGPTVRRRASPPARPRWWPCSPSSPPASP---SPSPARTSPPSSSP 206
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 403 GRGERSPRRWLQPRLAVPRQASTSVPRTP 317
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 348 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 181
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 686 PGXXPAGTRAWXAGPRVPPGXPXXXAPGAAXPPPPXXNP 802
P P+G RA + R P G A PPPP P
Sbjct: 99 PSSAPSGGRATSSEARESPHATSVDDGGRAPPPPPLPRP 137
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,802,640
Number of Sequences: 37544
Number of extensions: 517883
Number of successful extensions: 2493
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2425
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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