Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_D13
(801 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 34 0.52
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 34 0.69
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 6.4
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 6.4
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 31 6.4
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 6.4
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 6.4
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 6.4
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 6.4
AB113647-1|BAD26751.1| 1475|Homo sapiens RGD, leucine-rich repea... 31 6.4
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 30 8.5
X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for ... 30 8.5
BC110812-1|AAI10813.1| 238|Homo sapiens complement component 1,... 30 8.5
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 34.3 bits (75), Expect = 0.52
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXPR 653
GP P GP P G P G Q GP + PP P+
Sbjct: 682 GPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQSHIGPQGPPGPQ 726
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP++ GP P G P G Q GP PP P
Sbjct: 712 GPQSHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHP 755
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 33.9 bits (74), Expect = 0.69
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXPR 653
GP P GP P G P G Q GP PP P+
Sbjct: 682 GPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQ 726
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP+ GP P G P G Q GP PP P
Sbjct: 712 GPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHP 755
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP P PGP G P G+ GP PP P
Sbjct: 1522 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGP 1565
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP P PGP G P G+ GP PP P
Sbjct: 1522 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPRGEAGHPGPPGP 1565
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP P PGP G P G+ GP PP P
Sbjct: 275 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGP 318
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP P PGP G P G+ GP PP P
Sbjct: 1522 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGP 1565
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP P PGP G P G+ GP PP P
Sbjct: 1522 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGP 1565
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP P PGP G P G+ GP PP P
Sbjct: 1522 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGP 1565
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -3
Query: 787 GPEAPXXXPGPXXPXGGXXPXXXXGAQXXGGPXNXXNXXXPPXP 656
GP P PGP G P G+ GP PP P
Sbjct: 1476 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGP 1519
>AB113647-1|BAD26751.1| 1475|Homo sapiens RGD, leucine-rich repeat,
tropomodulin and proline-rich containing protein
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 287 WIDKRLSWNAGRMGLQHLAGVLGTLVEA*RGTAKRGC 397
W+ R W AGR GL AGV +L RGC
Sbjct: 432 WMTGRADWRAGRGGLGPPAGVANSLPPQLFAAVSRGC 468
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 653 AGSRRGGXVXXVXGPPXPLGXXXXSGXPXPXGGSGP 760
AG+ G + GPP P G G P P G GP
Sbjct: 788 AGNDGAGGLPGPLGPPGPAGLLGEKGEPGPRGLVGP 823
>X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for
pro-alpha 2 (V) collagen chain. ).
Length = 1099
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 653 AGSRRGGXVXXVXGPPXPLGXXXXSGXPXPXGGSGP 760
AG+ G + GPP P G G P P G GP
Sbjct: 391 AGNDGAGGLPGPLGPPGPAGLLGEKGEPGPRGLVGP 426
>BC110812-1|AAI10813.1| 238|Homo sapiens complement component 1, q
subcomponent-like 4 protein.
Length = 238
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 656 GSRRGGXVXXVXGPPXPLGXXXXSGXPXPXGGSGPG 763
G R + GPP P G G P P G GPG
Sbjct: 61 GRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPG 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,472,123
Number of Sequences: 237096
Number of extensions: 2068752
Number of successful extensions: 14173
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13052
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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