Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_D06
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF541949-1|AAN34653.1|  406|Drosophila melanogaster unknown prot...    36   0.090
AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-P...    31   1.9  
AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembran...    31   1.9  
AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-P...    29   5.9  

>AF541949-1|AAN34653.1|  406|Drosophila melanogaster unknown
           protein.
          Length = 406

 Score = 35.5 bits (78), Expect = 0.090
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 210 YNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGG 332
           YN G R YN  R+    +Y +   N ++ NY+NR  GGR G
Sbjct: 339 YNRGARGYNRGRNINHNNYNRGSNNNNNNNYNNR--GGRRG 377


>AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-PB,
           isoform B protein.
          Length = 636

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 174 HHHGLHGFHNCLDCYCLYKNLCIRYFYHHCSSLVHNNH 61
           HHH  HG +   D +  +    + + +HH   L H++H
Sbjct: 146 HHHHHHGMYEDPDAHLGHHRPLVMHRHHHHQQLAHHHH 183


>AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembrane
           protein Pxb protein.
          Length = 636

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 174 HHHGLHGFHNCLDCYCLYKNLCIRYFYHHCSSLVHNNH 61
           HHH  HG +   D +  +    + + +HH   L H++H
Sbjct: 146 HHHHHHGMYEDPDAHLGHHRPLVMHRHHHHQQLAHHHH 183


>AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-PA
            protein.
          Length = 1330

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +3

Query: 201  DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMR 356
            D   N G  SY+  R R + SY +    ESS +   +         +RKR R
Sbjct: 1151 DRERNRGNSSYDRERKRGNSSYDRERNRESSYDKERKNRNAVAHDRQRKRDR 1202


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,666,742
Number of Sequences: 53049
Number of extensions: 491707
Number of successful extensions: 1815
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)