Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_D03
         (828 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63420-1|AAC50817.1|  753|Homo sapiens Sp140 protein protein.          34   0.55 
U36500-1|AAB18617.1|  882|Homo sapiens LYSP100-B protein.              34   0.55 
BC105960-1|AAI05961.1|  840|Homo sapiens SP140 protein protein.        34   0.55 
BC105744-1|AAI05745.1|  807|Homo sapiens SP140 protein protein.        34   0.55 
BC105743-1|AAI05744.1|  807|Homo sapiens SP140 protein protein.        34   0.55 
AC009949-1|AAX88868.1|  453|Homo sapiens unknown protein.              34   0.55 

>U63420-1|AAC50817.1|  753|Homo sapiens Sp140 protein protein.
          Length = 753

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 115 RSGGGWAWRNRCNRVFHSQCHHP----QGTPWNVVLIHL 219
           R GG     + C+RVFH  CH P    + TPWN +   +
Sbjct: 583 RDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCRM 621


>U36500-1|AAB18617.1|  882|Homo sapiens LYSP100-B protein.
          Length = 882

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 115 RSGGGWAWRNRCNRVFHSQCHHP----QGTPWNVVLIHL 219
           R GG     + C+RVFH  CH P    + TPWN +   +
Sbjct: 697 RDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCRM 735


>BC105960-1|AAI05961.1|  840|Homo sapiens SP140 protein protein.
          Length = 840

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 115 RSGGGWAWRNRCNRVFHSQCHHP----QGTPWNVVLIHL 219
           R GG     + C+RVFH  CH P    + TPWN +   +
Sbjct: 670 RDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCRM 708


>BC105744-1|AAI05745.1|  807|Homo sapiens SP140 protein protein.
          Length = 807

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 115 RSGGGWAWRNRCNRVFHSQCHHP----QGTPWNVVLIHL 219
           R GG     + C+RVFH  CH P    + TPWN +   +
Sbjct: 637 RDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCRM 675


>BC105743-1|AAI05744.1|  807|Homo sapiens SP140 protein protein.
          Length = 807

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 115 RSGGGWAWRNRCNRVFHSQCHHP----QGTPWNVVLIHL 219
           R GG     + C+RVFH  CH P    + TPWN +   +
Sbjct: 637 RDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCRM 675


>AC009949-1|AAX88868.1|  453|Homo sapiens unknown protein.
          Length = 453

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 115 RSGGGWAWRNRCNRVFHSQCHHP----QGTPWNVVLIHL 219
           R GG     + C+RVFH  CH P    + TPWN +   +
Sbjct: 283 RDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCRM 321


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,844,167
Number of Sequences: 237096
Number of extensions: 1572630
Number of successful extensions: 3870
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3870
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)