Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_D02
(900 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 31 0.94
11_01_0385 + 2915532-2916482 31 1.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.2
06_01_0690 + 5033943-5034740 30 2.9
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.9
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 30 2.9
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 3.8
11_01_0066 - 536281-537196,537397-537452 29 5.0
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 5.0
12_02_1174 - 26696869-26698191 29 6.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.7
06_03_0905 + 25843547-25844314 29 6.7
04_04_0057 + 22410167-22411330 29 6.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.8
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 8.8
03_01_0540 - 4055635-4055743,4055829-4055981,4056037-4056104,405... 28 8.8
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 726 PPXPXXXPPTXAXXXPGPRXPXXRXXXXPXRPPXAXXXAEXP 851
PP P PP A P P P R P +PP + P
Sbjct: 64 PPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLP 105
>11_01_0385 + 2915532-2916482
Length = 316
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +3
Query: 648 PGXKPGXXEPVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPRXPXXRXXXXPXRPP 824
P P P P P + PP P PPT A PG + P P PP
Sbjct: 223 PPLPPFPSHPPPTPAWPQPGNKWPPLPPFPSHPPPTPAWPHPGNQWPP--LPPFPFHPP 279
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +3
Query: 648 PGXKPGXXEPVPXPLGXEXHPAXXXXPPXPXXXPP-TXAXXXPGPRXPXXRXXXXPXRPP 824
P G P P PL H PP P PP A G P P PP
Sbjct: 276 PPPPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPP 335
Query: 825 XA 830
A
Sbjct: 336 PA 337
>06_01_0690 + 5033943-5034740
Length = 265
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 787 GXLGPGXXXAXVGGSXXGXGGXXXXAGWXSXPXGXGTGSXXPGLXP 650
G GP A GG G GG G G G+GS G P
Sbjct: 220 GGYGPYGGYAQAGGQGGGGGGGQSGPGGSGSGSGSGSGSGSAGWHP 265
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/68 (27%), Positives = 19/68 (27%)
Frame = +3
Query: 648 PGXKPGXXEPVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPRXPXXRXXXXPXRPPX 827
P KP P P P P PP P PP P P P P PP
Sbjct: 317 PPPKPAAAAPPPPP-----PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371
Query: 828 AXXXAEXP 851
P
Sbjct: 372 GKKGGPPP 379
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = -3
Query: 829 AXGGRXGXXXXRXXGXLGPGXXXAXVGGSXXGXGGXXXXAGWXSXPXGXGTGSXXPGLXP 650
A GGR G G G G A GG+ G G AG G G G+ P
Sbjct: 261 AGGGRGGAGAGGGHGGAGAGAGGAR-GGAGAGGGHGGAGAGAGGGRGGAGAGAGGGAQEP 319
Query: 649 GSHXA 635
G A
Sbjct: 320 GGGGA 324
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 206 VRVHRADTGRSSXELDRQTTELERXGMGLQXLAGVLGTL 322
V+ H + R S EL+RQ ELER G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +3
Query: 675 PVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPRXPXXRXXXXPXRPPXAXXXAEXPX 854
P P P P+ PP P PP P P P PP P
Sbjct: 207 PRPLPPASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTPPPIPTATVRPPP 266
Query: 855 XL 860
L
Sbjct: 267 PL 268
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 648 PGXKPGXXEPVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPR 782
PG KP +P P P + P PP P P PGP+
Sbjct: 174 PGPKPKPPKPGPKPKPPKPGPKPKPKPPKP-GPKPKPKPPKPGPK 217
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = +3
Query: 648 PGXKPGXXEPVPXPLGXEXHPAXXXXPPXPXXXP---PTXAXXXPGPRXPXXRXXXXPXR 818
P KP +P P P P PP P P P P P+ P P
Sbjct: 163 PKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKPKPGP 222
Query: 819 P 821
P
Sbjct: 223 P 223
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +3
Query: 648 PGXKPGXXEPVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPRXPXXRXXXXPXRPP 824
P P PV P + P PP P PPT PG P PP
Sbjct: 195 PTRPPSVKPPVVQP---KPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPP 250
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 675 PVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPRXPXXRXXXXPXRPP 824
P P PL P PP PP+ P P P P PP
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPP 1186
>06_03_0905 + 25843547-25844314
Length = 255
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 648 PGXKPGXXEPVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPRXPXXR 797
PG G P P P +P+ PP P PP P P+ P R
Sbjct: 50 PGHPKGPKNPTPRPPKGPTYPSPVTRPP-PLVAPPKVPVTHP-PKGPVTR 97
>04_04_0057 + 22410167-22411330
Length = 387
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +3
Query: 726 PPXPXXXPPTXAXXXPGP-RXPXXRXXXXPXRPPXA 830
PP P PP A P P R P + P PP A
Sbjct: 181 PPPPPPPPPAAAAASPSPERSPRCQPSPPPPPPPHA 216
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 675 PVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPRXPXXRXXXXPXRPP 824
P P PL P+ PP P P P P P P PP
Sbjct: 589 PPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPP 638
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 645 LPGXKPGXXEPVPXPLGXEXHPAXXXXPPXPXXXPPTXAXXXPGPRXP 788
L G K P P P HPA PP P PR P
Sbjct: 213 LKGPKGAPPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPMAAAPRQP 260
>03_01_0540 -
4055635-4055743,4055829-4055981,4056037-4056104,
4056486-4056580,4057180-4057241,4057371-4057410,
4058124-4059141,4059231-4059611,4059873-4059880,
4061005-4061067,4061416-4061719
Length = 766
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = -3
Query: 322 KRSEDTSQVLQPHSPAFQLSRLSIQFX*RSASIRTVDSDSRMLACLXCRVRLTTILESGG 143
+ SED +QVLQ S ++ + + +R + S ++ + + R+TT+ +S G
Sbjct: 695 RASEDLNQVLQ-ESTSYPSAHAEAIRSKINVVLRAIGS---LVQTVPVQPRMTTVADSHG 750
Query: 142 DSRSYVDEESSRS 104
S+ Y +EE + S
Sbjct: 751 VSKIYSEEEKNNS 763
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,546,414
Number of Sequences: 37544
Number of extensions: 304118
Number of successful extensions: 1091
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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