Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_D01
(773 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 239 2e-63
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 235 2e-62
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334... 32 0.58
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 5.4
09_06_0103 + 20873310-20873382,20873530-20873735 29 5.4
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731... 28 7.2
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119... 28 7.2
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561... 28 7.2
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 7.2
08_02_1300 + 25972496-25972582,25972664-25972723,25973786-259738... 28 9.5
05_07_0129 - 27886738-27886767,27887043-27887312,27888407-278884... 28 9.5
04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727 28 9.5
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 28 9.5
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 239 bits (584), Expect = 2e-63
Identities = 111/183 (60%), Positives = 137/183 (74%)
Frame = +1
Query: 58 ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 237
++A G L+ E+DV MLAA HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1 MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60
Query: 238 KLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAF 417
KL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F
Sbjct: 61 KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
Query: 418 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTXSPLXFVDIAIPCNTKSSHSIGLMWW 597
EPRLLI+ DP DHQPI E++ NIP IA C+T SP+ +VDI IP N K +SIG ++W
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFW 180
Query: 598 LLA 606
LLA
Sbjct: 181 LLA 183
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 235 bits (576), Expect = 2e-62
Identities = 108/172 (62%), Positives = 131/172 (76%)
Frame = +1
Query: 91 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 270
L+ E+D+ MLAA HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71
Query: 271 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 450
IENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131
Query: 451 AQDHQPITEASYVNIPVIALCNTXSPLXFVDIAIPCNTKSSHSIGLMWWLLA 606
DHQPI E++ NIP IA C+T SP+ +VDI IP N K SIG ++WLLA
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLA 183
>09_04_0594 -
18831011-18831360,18831562-18832111,18832364-18833406,
18833496-18833760,18835194-18835340,18835431-18835511,
18835626-18835804,18835935-18836093,18836269-18836398,
18836935-18837094,18837337-18837419,18837865-18837915,
18838035-18838151,18838273-18838359
Length = 1133
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 1 YLEVHFASQWHYTRLVVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETY 180
YL V F ++W + + T + G L +ED+ K L+A H E + MET+
Sbjct: 237 YLGVPFIAEWFRNKGHYIKSQVTAATGAIALMQLQEDLKKHLSAECHYTEEELEAYMETH 296
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 158 TFSAPRWVVAASILVTSSSLRASTSNP 78
TF A RWV+AA V + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126
>09_06_0103 + 20873310-20873382,20873530-20873735
Length = 92
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 336 VCRAHRCYAYC---GTFHTRCFY*PDPSCIP*TSSLDCI 443
+CR+ RC YC G RC + DPS ++ +C+
Sbjct: 45 LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83
>12_01_0798 +
7314885-7314953,7315324-7315387,7315489-7315677,
7316430-7316625,7316727-7316953,7317177-7318134,
7320104-7321307,7321517-7321876,7321965-7323195,
7323334-7323599,7323738-7326335
Length = 2453
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 572 EDLVLHGIAMSTNXSGEXVLHKAITGMLTYEASVMG*WSCAGSNTIKRRGSRNAAWIWLV 393
ED L+ I + S E + ITG V+ S G + +K R +RN+A W
Sbjct: 4 EDEALYEIRRLASGSHEILREGEITGTSGAAGGVLSYLSLQGVSKLKERWTRNSALGWSK 63
Query: 392 K 390
K
Sbjct: 64 K 64
>08_01_0152 -
1190358-1190462,1190648-1190765,1191134-1192691,
1193338-1193530
Length = 657
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -2
Query: 340 QTSVQHADRRAVMR*RTHQRGSRWLRQHEQPEQVFPRYDAS*SHGYHQHVVC 185
+ SV + D+ ++ RT RGS L QPE + PRY+ H VC
Sbjct: 269 KNSVNNDDKPMLVSIRTKGRGSSTLPSIAQPEPL-PRYNKHWRRKAHSMCVC 319
>01_06_0902 +
32853708-32853739,32854787-32855596,32856094-32856157,
32856375-32856446
Length = 325
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 165 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 272
P +C+ T C C K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/78 (28%), Positives = 27/78 (34%)
Frame = +3
Query: 111 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*C 290
CH C P GR+ P G + CD A+ G TC C H+ P C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378
Query: 291 VRHLITALRSACCTEVCR 344
R T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396
>08_02_1300 +
25972496-25972582,25972664-25972723,25973786-25973868,
25974120-25974166,25975194-25975352,25975466-25975644,
25975738-25975818,25975903-25976046,25976246-25976347
Length = 313
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 1 YLEVHFASQWHYTRLVVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETY 180
+L V F ++W + + T + G L +ED+ K L+A H E + M+ +
Sbjct: 120 FLGVPFVAEWFRDKGHFIKSQVTAAAGAIALMQLQEDLKKYLSAEGHYTEEELEMFMQNH 179
>05_07_0129 -
27886738-27886767,27887043-27887312,27888407-27888482,
27889148-27889962
Length = 396
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 578 EWEDLVLHGIAMSTNXSGEXVLHKAITG 495
EW++L+L G A+++ SGE L A G
Sbjct: 72 EWDELLLSGAALASESSGELQLVAASPG 99
>04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727
Length = 706
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 168 DGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*CVRHLITALRSACCTEVCRA 347
DG Q+ C + C L+ + +CSG CC++ PR + +T + +++ R
Sbjct: 153 DGGTGYQSGC-FSQCRDLSGLVDGSCSGMGCCQT-TIPRGMYYYNVTFDKRFNTSQISRF 210
Query: 348 HRC 356
RC
Sbjct: 211 GRC 213
>01_06_0575 -
30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 201 WYPCDQLASYLGKTCSGCSCCRSHREP 281
++PC +GKT S C + HR P
Sbjct: 615 YHPCQPTVRLMGKTVSVCERSKEHRVP 641
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,893,426
Number of Sequences: 37544
Number of extensions: 483041
Number of successful extensions: 1088
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -