Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_C21
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 243 1e-64
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 36 0.044
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 29 3.8
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 29 3.8
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 29 5.0
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 29 5.0
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 29 5.0
Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z22177-9|CAE18052.1| 110|Caenorhabditis elegans Hypothetical pr... 28 6.7
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81116-14|CAB03310.2| 335|Caenorhabditis elegans Hypothetical p... 28 8.8
Z81100-6|CAB03195.2| 335|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF043703-4|AAK21502.2| 212|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 243 bits (594), Expect = 1e-64
Identities = 114/220 (51%), Positives = 142/220 (64%), Gaps = 3/220 (1%)
Frame = +2
Query: 104 GKDINPHIPQYIASAPWYYGTSGPTLKHQRPQEDREGQFTKLDKYYNKGVDVTKVATKFR 283
G+DINPHIP +I+ PWY + GPTLKHQRP E+RE + T++ ++Y KG K ATKFR
Sbjct: 53 GRDINPHIPMFISQNPWYVPSEGPTLKHQRPHEEREKKMTQIHEWYQKGT-TGKSATKFR 111
Query: 284 KGACENCGAMTHKKKDCLERPRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPE 463
KGACENCGAM H+K+DC +RPRK AK TN IA D++ QP+L L +D KRDRWNGYDP
Sbjct: 112 KGACENCGAMGHQKRDCFDRPRKSNAKETNDNIAEDDYVQPNLTLGFDAKRDRWNGYDPS 171
Query: 464 QHKAIIEEYQKVEEAK---RELRAKKLEIDPTAXXXXXXXXXXXXXXXXXXXMPGTKVDS 634
HK +IE+Y+ +EEA+ RE K+ E++P +DS
Sbjct: 172 THKQVIEDYEHLEEARKVVREHEMKEGEVEPATTEDGAPKDEDMYAEDADMAGVSVDMDS 231
Query: 635 KQRITVRNLRIREDTAKYLRNLDPNSAYYXPQDSLYEXQP 754
+ RITVRNLRIREDTAKYL NL NS YY P+ P
Sbjct: 232 RTRITVRNLRIREDTAKYLYNLAENSPYYDPKSRSMRENP 271
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.044
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Frame = +2
Query: 191 RPQEDREGQFTKLDKYYNKGVDVTKVATKFRKGACENCGAMTHKKKDCLERPRKIGAKFT 370
+ QE+ E T+L++ KG+D + K ++ E + DCL + RK A+ T
Sbjct: 650 KAQEETEKVKTELEQ--EKGIDYQSILEKIKEAREEVKNVIRSDYTDCLNKVRK--AEDT 705
Query: 371 NAGIAADEFAQPDLNLSYDGK-RDRWNGYDPEQHKAIIEEYQKV-EEAKREL-RAKKLE 538
A I +++ + + GK +D+ E KA EE+QKV EE ++E+ + KK+E
Sbjct: 706 LAKI-ENKYKKESEEVKKTGKNKDKVEKTKEEVEKA-KEEFQKVKEEFQKEVEKVKKVE 762
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 344 PRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPEQHKAII 481
P + AK +D++ +P + S W GY P++ A++
Sbjct: 691 PTPVPAKMCGTVSDSDDWREPSGSPSESNSSTEWGGYTPQEQHAVV 736
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 344 PRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPEQHKAII 481
P + AK +D++ +P + S W GY P++ A++
Sbjct: 691 PTPVPAKMCGTVSDSDDWREPSGSPSESNSSTEWGGYTPQEQHAVV 736
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 287 GACENCGAMTHKKKDCLE 340
G C CGA TH ++DC E
Sbjct: 307 GCCNVCGANTHLRRDCPE 324
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 671 PGYAGYEL*CAASNPPLCRACPL 603
PG + C A++PP CR CP+
Sbjct: 149 PGKTTIQAPCEAASPPPCRVCPV 171
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 413 NLSYDGKR--DRWNGYDPEQHKAIIEEYQKVEEAKREL 520
N DGKR + YDP H+ +E+Y K E +R++
Sbjct: 7 NADDDGKRVQNEEGNYDPTDHQRQMEDYYKQYEEQRQV 44
>Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical
protein ZC504.1 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -3
Query: 385 RNSCISEFCTYFSRSLQAILLLVCHRTTVFTCPFPEFCCYFCHINSF 245
R FC Y R LQ CH + TCP FC Y I+SF
Sbjct: 415 RYKTTDHFCPYAIRHLQ------CHPSGS-TCPMGYFCQYLFEISSF 454
>Z22177-9|CAE18052.1| 110|Caenorhabditis elegans Hypothetical
protein ZK512.11 protein.
Length = 110
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 115 YVFAFMLLPVFISFSFVMAVLFDFAKVKFYSL 20
YVFAF+++ V + F VMA F+ K+K Y +
Sbjct: 49 YVFAFLVVLVAVIFVIVMAKCFN-VKIKEYDI 79
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 710 NWGPDSAGTWLCPPGYAG 657
N G S G +CPPGYAG
Sbjct: 875 NGGTVSGGQCVCPPGYAG 892
>Z81116-14|CAB03310.2| 335|Caenorhabditis elegans Hypothetical
protein K08G2.8 protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 396 NSSAAIPALVNFAPIFLGLSKQSFFLCVIAPQ-FSHAPFLNFVATFVTSTPLL*YLSS 226
N AIP +V F PI G+ ++ L ++ PQ FS+ F V ST L+ YL +
Sbjct: 247 NLQIAIPLIVIFVPIIAGMIFKA--LSIVNPQAFSNLLNFYFSLHGVLSTILMLYLQN 302
>Z81100-6|CAB03195.2| 335|Caenorhabditis elegans Hypothetical
protein K08G2.8 protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 396 NSSAAIPALVNFAPIFLGLSKQSFFLCVIAPQ-FSHAPFLNFVATFVTSTPLL*YLSS 226
N AIP +V F PI G+ ++ L ++ PQ FS+ F V ST L+ YL +
Sbjct: 247 NLQIAIPLIVIFVPIIAGMIFKA--LSIVNPQAFSNLLNFYFSLHGVLSTILMLYLQN 302
>Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical
protein F15D4.5 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Frame = +2
Query: 80 NEDW*KHEGKDINPHIPQYIASAPWY----YGTSGPTLKHQRPQE-DREGQFTKLDKYYN 244
N+DW + + IN H+ P + SG +++Q+ ++G YN
Sbjct: 297 NKDWNNNTQEAINRHVCHLSTILPRMEAALHQPSGYYVQYQQENPVTKQGNVAPKWNEYN 356
Query: 245 KGVDVTKVATKFRKGACENCGAMTHKKKDC 334
D + K + C CG H + C
Sbjct: 357 PPKDAIENTNKGVENTCAFCGLKNHTSEQC 386
>AF043703-4|AAK21502.2| 212|Caenorhabditis elegans Hypothetical
protein W10C8.4a protein.
Length = 212
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +2
Query: 338 ERPRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPEQHKAIIEEYQKV 499
E K+ K A + + L +YD +++ WN + E ++ EY+++
Sbjct: 93 EEVDKVIQKLEELNTAMNPILRATLTKNYDARKECWNVFKEESLFPLLREYEEL 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,315,713
Number of Sequences: 27780
Number of extensions: 326098
Number of successful extensions: 1247
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -