Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_C19
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 36 0.027
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.027
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.027
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.027
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 36 0.027
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 35 0.062
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 34 0.11
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 34 0.11
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 34 0.11
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 34 0.14
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 34 0.14
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 34 0.14
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.19
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.19
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 33 0.19
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 33 0.19
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.19
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 33 0.25
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.33
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.33
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.33
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.44
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 32 0.58
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 32 0.58
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.0
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.3
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 31 1.3
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 31 1.3
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 30 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.8
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.3
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 30 2.3
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 30 2.3
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 30 2.3
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 30 2.3
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.3
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 3.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 3.1
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 29 3.1
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 29 3.1
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 4.1
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 4.1
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 4.1
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.1
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 29 4.1
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.4
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 29 5.4
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 29 5.4
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 29 5.4
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 5.4
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.4
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 7.1
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 28 7.1
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 7.1
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 9.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 9.4
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 9.4
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 9.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 9.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 9.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 9.4
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 318
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 319 XVG 327
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 318
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 319 XVG 327
G
Sbjct: 130 LFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 318
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 319 XVG 327
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 318
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 319 XVG 327
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 318
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 319 XVG 327
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 318
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 319 XVG 327
G
Sbjct: 130 LFG 132
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 166 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 315
YD D+P + L +L+ + E E V + +L W D RLSWNA
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 73 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 237
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 238 RESESTVRIQADLQMNWIDKRLSWN 312
E + + L+ WID++LSW+
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWD 91
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 73 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 237
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 238 RESESTVRIQADLQMNWIDKRLSWN 312
E + + L+ WID++LSW+
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWD 91
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 73 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 237
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 238 RESESTVRIQADLQMNWIDKRLSWN 312
E + + L+ WID++LSW+
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWD 91
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P + P PP P G P PPG P G + G P A G P
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPQG-----PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
Query: 610 XXXXXPDXXXXXGXP 566
P G P
Sbjct: 184 GPKGPPGPPGAPGAP 198
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 166 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 315
YD ++P + L +L+ ++E + + + ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P + P PP P G P PPG P G + G P A G P
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPQG-----PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
Query: 610 XXXXXPDXXXXXGXP 566
P G P
Sbjct: 184 GPKGPPGPPGAPGAP 198
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXX---PXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAG 620
PG PG P PPP P G P PPG P G P PR AG
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP----PPPPPRYPSAG 359
Query: 619 GG 614
G
Sbjct: 360 PG 361
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 6/69 (8%)
Frame = -3
Query: 789 PGPXPGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXX------PPXAXXXPXAGHXXPAXX 628
PGP PG P PP P G P P G PP P AG
Sbjct: 308 PGP-PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366
Query: 627 XPEEGPXXP 601
P P P
Sbjct: 367 PPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXX---PXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAG 620
PG PG P PPP P G P PPG P G P PR AG
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP----PPPPPRYPSAG 369
Query: 619 GG 614
G
Sbjct: 370 PG 371
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 6/69 (8%)
Frame = -3
Query: 789 PGPXPGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXX------PPXAXXXPXAGHXXPAXX 628
PGP PG P PP P G P P G PP P AG
Sbjct: 318 PGP-PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376
Query: 627 XPEEGPXXP 601
P P P
Sbjct: 377 PPSRPPAPP 385
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 199 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 312
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 199 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 312
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 306
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 307 W 309
W
Sbjct: 85 W 85
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.25
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +1
Query: 61 YYSCYXFLLTCAIASAAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHL 222
+Y+ + +L +IA CEN +L S +++ + YDR P ++VN+T+ L
Sbjct: 44 FYALFSHILFFSIA--LNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVL 101
Query: 223 RHA-NIRESESTVRIQADLQMNWIDKRLSWN 312
++E++ W D RLSW+
Sbjct: 102 GILIELKENQQLAAYVISHTQRWYDGRLSWD 132
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = -2
Query: 787 GXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGPX 608
G P P PP P GG PP P G G P P G P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 607 XXXXPDXXXXXGXP 566
P G P
Sbjct: 772 PPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 567 GXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXXGG 746
G P G G PP G G P + P PGG PP G GG
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Frame = -3
Query: 789 PGPXPGGXX--RRGPXPPRXXA---PAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXX 625
P P PGG GP PP P P P G PP P G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 624 PEEGPXXP 601
P G P
Sbjct: 788 PPPGMFAP 795
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Frame = -3
Query: 756 GPXPPRXXAPAGAXXXXPXXPXGXXPPXA---XXXPXAGHXXPAXXXPEEGPXXPGXRXP 586
GP PP P P P G PP P G P P P PG P
Sbjct: 712 GPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 585 XXXXXXPXG 559
P G
Sbjct: 771 PPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = -2
Query: 787 GXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGPX 608
G P P PP P GG PP P G G P P G P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 607 XXXXPDXXXXXGXP 566
P G P
Sbjct: 772 PPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 567 GXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXXGG 746
G P G G PP G G P + P PGG PP G GG
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Frame = -3
Query: 789 PGPXPGGXX--RRGPXPPRXXA---PAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXX 625
P P PGG GP PP P P P G PP P G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 624 PEEGPXXP 601
P G P
Sbjct: 788 PPPGMFAP 795
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Frame = -3
Query: 756 GPXPPRXXAPAGAXXXXPXXPXGXXPPXA---XXXPXAGHXXPAXXXPEEGPXXPGXRXP 586
GP PP P P P G PP P G P P P PG P
Sbjct: 712 GPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 585 XXXXXXPXG 559
P G
Sbjct: 771 PPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = -2
Query: 787 GXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGPX 608
G P P PP P GG PP P G G P P G P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 607 XXXXPDXXXXXGXP 566
P G P
Sbjct: 355 PPPPPPGGFKGGPP 368
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 567 GXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXXGG 746
G P G G PP G G P + P PGG PP G GG
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Frame = -3
Query: 789 PGPXPGGXX--RRGPXPPRXXA---PAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXX 625
P P PGG GP PP P P P G PP P G
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Query: 624 PEEGPXXP 601
P G P
Sbjct: 371 PPPGMFAP 378
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Frame = -3
Query: 756 GPXPPRXXAPAGAXXXXPXXPXGXXPPXA---XXXPXAGHXXPAXXXPEEGPXXPGXRXP 586
GP PP P P P G PP P G P P P PG P
Sbjct: 295 GPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 585 XXXXXXPXG 559
P G
Sbjct: 354 PPPPPPPGG 362
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 208 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 315
L +L+ ++E E V + +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/83 (25%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Frame = -3
Query: 789 PGPXPGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXXPP-XAXXXPXAGHXXPAXXXPEEG 613
PGP PG GP P +P G P P P + + P+ P +
Sbjct: 940 PGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSD- 998
Query: 612 PXXPGXRXPXXXXXXPXGXPXXG 544
P P P P G G
Sbjct: 999 PVKPSPSGPSPNGPSPNGPSPNG 1021
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNA---GXVGLQHLAG 345
++ E + + ++ L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P + P PP P G P PPG P G A + G P G P
Sbjct: 129 PGRPPQQPCDPITPPPCQPCPQG-----PPGPPGPPGPSGDAGSNGNPGSPGQDGQPGAP 183
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 166 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 315
YD D+P + L L+ + E V + ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +2
Query: 599 PGXXGPSSGXXXAGXXXP--AXGXXXAXGGXXPXGXXGXXXXAPAGAXXRGGXGPRRXXP 772
PG GP+ G AG P A G + GG P G G PAG G P
Sbjct: 177 PGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPG--PPGPAGNPGTDG-APGNPGA 233
Query: 773 PG 778
PG
Sbjct: 234 PG 235
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = +1
Query: 73 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NI 237
+ F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 8 FVFYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTL 67
Query: 238 RESESTVRIQADLQMNWIDKRLSWN 312
+E T+ ++ + W D+ L WN
Sbjct: 68 DPAEETINFSSEFILQWKDEFLFWN 92
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 73 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANI 237
+ FLL I +S ++++LL Y++ P + V +L R ++
Sbjct: 9 HIFLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDV 68
Query: 238 RESESTVRIQADLQMNWIDKRLSWN 312
E + L+M W DK+L+WN
Sbjct: 69 DEVNQVLTTSLWLEMQWYDKKLTWN 93
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P + P PP P G P PPG P G A G P G P
Sbjct: 96 PGHPPQQPCDPITPPPCQPCPQG-----PPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAP 150
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +2
Query: 599 PGXXGPSSGXXXAGXXXPAXGXXXAXGGXXPXGXXGXXXXAPAGAXXRGGXGPRRXXPPG 778
PG P G P A G P G G P G G GP + P G
Sbjct: 375 PGNFAPPPQSGPPGAFAPPPSAFGAPQG--PGGPGGYGPPPPGGPGAPGSYGPPQGGPGG 432
Query: 779 XGP 787
GP
Sbjct: 433 FGP 435
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +3
Query: 594 GXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXP--GGXGXXXXXPPXGXXXGGGXXXGAX 767
G GPPP G P G P GG G PP G G GA
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP-PPTGFPPVGAPPPGAA 462
Query: 768 XRPGXXP 788
PG P
Sbjct: 463 GAPGGNP 469
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -3
Query: 777 PGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXXPEEGPXXPG 598
PGG GP PP G+ P G PP P A + P P G PG
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP-PPGGPGA-YGPPPTGFPPVGAPPPG 460
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = -3
Query: 783 PXPGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXXPEEGPXX 604
P PGG G P P G P P PP P A P P
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFA 471
Query: 603 PG 598
G
Sbjct: 472 RG 473
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 97 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 270
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 271 DLQMNWIDKRLSWNAGXVGLQH 336
+ + W D L WN V ++
Sbjct: 77 EFLLRWYDPILHWNQSAVSYEN 98
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 181 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXV-GLQHL 339
PP +I + L++ ++ + E E D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 118 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 291
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 292 DKRLSWN 312
D RL WN
Sbjct: 93 DDRLMWN 99
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P + P PP P G P PPG P G + G P A G P
Sbjct: 129 PGRPPQQPCEPITPPPWKPCPQG-----PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/93 (23%), Positives = 26/93 (27%)
Frame = -3
Query: 819 GGXXXAXTXAPGPXPGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXX 640
G T +P P P G P P P P G P + P AG
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG-GS 320
Query: 639 PAXXXPEEGPXXPGXRXPXXXXXXPXGXPXXGT 541
P P P + P G P G+
Sbjct: 321 PPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGS 353
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/93 (23%), Positives = 26/93 (27%)
Frame = -3
Query: 819 GGXXXAXTXAPGPXPGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXX 640
G T +P P P G P P P P G P + P AG
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG-GS 341
Query: 639 PAXXXPEEGPXXPGXRXPXXXXXXPXGXPXXGT 541
P P P + P G P G+
Sbjct: 342 PPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGS 374
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/93 (23%), Positives = 26/93 (27%)
Frame = -3
Query: 819 GGXXXAXTXAPGPXPGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXX 640
G T +P P P G P P P P G P + P AG
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG-GS 326
Query: 639 PAXXXPEEGPXXPGXRXPXXXXXXPXGXPXXGT 541
P P P + P G P G+
Sbjct: 327 PPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGS 359
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Frame = -3
Query: 792 APG-PXPGGXXRRGPXPPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXXPEE 616
APG P G P + P P P G P P PA P
Sbjct: 129 APGAPGAAGKGASAPCEAKTPPPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPG 188
Query: 615 GPXXPGXRXP 586
P PG P
Sbjct: 189 PPGPPGPAGP 198
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +1
Query: 82 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 246
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 247 ESTVRIQADLQMNWIDKRLSWNAGXVG 327
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +1
Query: 82 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 246
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 247 ESTVRIQADLQMNWIDKRLSWNAGXVG 327
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +1
Query: 82 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 246
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 247 ESTVRIQADLQMNWIDKRLSWNAGXVG 327
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +1
Query: 82 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 246
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 247 ESTVRIQADLQMNWIDKRLSWNAGXVG 327
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG PG P PP GG P PPG P G G P GGP
Sbjct: 248 PGG-PGPAGPPGPPGPPGQDGSGGAAQ--PGPPGPPGPPGNDGQPGGPGQPGGPGQDGGP 304
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P P PP P G P PPG G G P A G P
Sbjct: 131 PGKPPVAPCEPTTPPPCKPCPQG-----PPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSP 185
Query: 610 XXXXXPDXXXXXGXP 566
P G P
Sbjct: 186 GPRGPPGPAGEAGAP 200
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 351 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 172
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 82 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 141
Query: 171 IVRCEERVD 145
I+ C R+D
Sbjct: 142 ILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 351 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 172
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 171 IVRCEERVD 145
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 208 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 312
L +L+ ++E V + +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P P PP P G P PPG G G P A G P
Sbjct: 126 PGKPPVAPCEPTTPPPCKPCPQG-----PPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSP 180
Query: 610 XXXXXPDXXXXXGXP 566
P G P
Sbjct: 181 GPRGPPGPAGEAGAP 195
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P P PP P G P PPG G G P A G P
Sbjct: 126 PGKPPVAPCEPTTPPPCKPCPQG-----PPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSP 180
Query: 610 XXXXXPDXXXXXGXP 566
P G P
Sbjct: 181 GPRGPPGPAGEAGAP 195
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +1
Query: 103 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 282
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 283 NWIDKRLSWNAGXVGLQHL 339
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 351 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 172
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 171 IVRCEERVD 145
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 202 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNA 315
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.1
Identities = 29/107 (27%), Positives = 31/107 (28%), Gaps = 2/107 (1%)
Frame = +2
Query: 473 PXPSPXXAXETLXPTXXXXASXRVPXXGXPXGXXXXXXGIRXPGXXGPSSGXXXAGXXXP 652
P P E + P P P G + PG GP AG P
Sbjct: 119 PGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGP 178
Query: 653 AXGXXXAXGGXXPXGXXGXXXXAPAGAXXRGGXG-PRRXXPPG-XGP 787
A G G P G G G G G P R PG GP
Sbjct: 179 A-GPPGPGGKPGPAGPPG--ENGRNGEPQPGSPGEPGRPGQPGSRGP 222
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 799 DXXPGXXPGRXXAPXXXPPPXXXPXGG-XXXXXPXPPGXXXPXGXAXAXG 653
D P PG P PP GG P PPG P G + G
Sbjct: 184 DAGPQGEPGEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNG 233
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 799 DXXPGXXPGRXXAPXXXPPPXXXPXGG-XXXXXPXPPGXXXPXGXAXAXG 653
D P PG P PP GG P PPG P G + G
Sbjct: 184 DAGPQGEPGEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNG 233
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 112 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 285
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 286 -WIDKRLSW 309
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 181 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 312
PP +++ + + + L+ ++ E E V D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/73 (24%), Positives = 21/73 (28%)
Frame = +3
Query: 561 PXGXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXX 740
P G P SG GPP + G P + PG P
Sbjct: 189 PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP 248
Query: 741 GGGXXXGAXXRPG 779
G GA +PG
Sbjct: 249 GSPGPAGAPGQPG 261
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/73 (24%), Positives = 21/73 (28%)
Frame = +3
Query: 561 PXGXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXX 740
P G P SG GPP + G P + PG P
Sbjct: 189 PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP 248
Query: 741 GGGXXXGAXXRPG 779
G GA +PG
Sbjct: 249 GSPGPAGAPGQPG 261
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/73 (24%), Positives = 21/73 (28%)
Frame = +3
Query: 561 PXGXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXX 740
P G P SG GPP + G P + PG P
Sbjct: 189 PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP 248
Query: 741 GGGXXXGAXXRPG 779
G GA +PG
Sbjct: 249 GSPGPAGAPGQPG 261
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/73 (24%), Positives = 21/73 (28%)
Frame = +3
Query: 561 PXGXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXX 740
P G P SG GPP + G P + PG P
Sbjct: 189 PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP 248
Query: 741 GGGXXXGAXXRPG 779
G GA +PG
Sbjct: 249 GSPGPAGAPGQPG 261
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/96 (26%), Positives = 27/96 (28%), Gaps = 3/96 (3%)
Frame = +2
Query: 479 PSPXXAXETLXPTXXXXASXRVPXXGXPX--GXXXXXXGIRXPGXXGPSSGXXXAGXXXP 652
P P A P + P G G I PG G AG P
Sbjct: 191 PGPMGAMGPKGPPGPKGSPGEPPQDGKSGDDGMAGQPGPIGRPGRDGMKGAPGAAGRLIP 250
Query: 653 AXGXXXAXGGXXPXGXXG-XXXXAPAGAXXRGGXGP 757
G A G P G G P G +G GP
Sbjct: 251 VPGPQGAPGKPGPIGPPGPKGNPGPDGQSYQGPPGP 286
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/73 (24%), Positives = 21/73 (28%)
Frame = +3
Query: 561 PXGXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXX 740
P G P SG GPP + G P + PG P
Sbjct: 187 PSGAPGQPGRSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGHVVDVPGTPGPAGPP 246
Query: 741 GGGXXXGAXXRPG 779
G GA +PG
Sbjct: 247 GPAGPAGAPGQPG 259
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 214 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWN 312
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 7.1
Identities = 27/109 (24%), Positives = 28/109 (25%), Gaps = 3/109 (2%)
Frame = +2
Query: 473 PXPSPXXAXETLXPTXXXXASXRVPXXGXPXGXXXXXXGIRXPGXXGPSSGXXXAGXXXP 652
P P E L P P P G + PG GP G P
Sbjct: 121 PGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGP 180
Query: 653 A--XGXXXAXGGXXPXGXXGXXXXAPAGAXXR-GGXGPRRXXPPGXGPG 790
A G G P G G GA G G P PG
Sbjct: 181 AGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQRGPAGEPG 229
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +3
Query: 612 GPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXXGGGXXXGAXXRPG 779
GPP +G P A P G PG G P G G GA PG
Sbjct: 192 GPPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPG-ADGLPGNPGAPGVPG 246
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXX-PXPPGXXXPXGXAXAXGXXPXPRXXXAG-G 617
P PG P P GG P PPG P G A G + AG
Sbjct: 205 PAGPPGPDGQPGAPGPDGQPGAGGTTSTNQPGPPGPAGPPGPAGPAGEDAYAQPSPAGTP 264
Query: 616 GPXXXXXPDXXXXXGXPXG 560
GP D P G
Sbjct: 265 GPPGPPGKDGEAGPDGPAG 283
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/56 (26%), Positives = 16/56 (28%)
Frame = -2
Query: 778 PGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
P P P P P GG P G P G + G P G P
Sbjct: 173 PAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDGAP 228
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 126 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 215
N+ P D+L + SG+P +LQNR P P
Sbjct: 114 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 142
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 126 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 215
N+ P D+L + SG+P +LQNR P P
Sbjct: 124 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 152
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/73 (24%), Positives = 21/73 (28%)
Frame = +3
Query: 561 PXGXPXXXXXSGXXXXXGPPPASXXRGXGXXPXAXAXPXGXXXPGGXGXXXXXPPXGXXX 740
P G P SG GPP + G P + PG P
Sbjct: 190 PSGAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP 249
Query: 741 GGGXXXGAXXRPG 779
G GA +PG
Sbjct: 250 GPPGPAGAPGQPG 262
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/56 (26%), Positives = 16/56 (28%)
Frame = -2
Query: 778 PGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
P P P P P GG P G P G + G P G P
Sbjct: 173 PAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDGAP 228
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPP--PXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGG 617
P PG AP P P P P P G P G A A G P A G
Sbjct: 132 PAGAPGPAGAPGAPGPQGPSGAPGQDAVGEGPGPAGPQGPAGDAGAPGQAGAPGHPGAPG 191
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPP--PXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGG 617
P PG AP P P P P P G P G A A G P A G
Sbjct: 132 PAGAPGPAGAPGAPGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAGAPGHPGAPG 191
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 789 PGPXPGGXXRRGPX-PPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXXPEEG 613
PG P G GP PP PAG P P G P A G PA G
Sbjct: 173 PGS-PAGPSGPGPAGPPGPAGPAG-NDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
Query: 612 P 610
P
Sbjct: 231 P 231
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = -2
Query: 790 PGXXPGRXXAPXXXPPPXXXPXGGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGP 611
PG P P PP P P PPG G + G P GGP
Sbjct: 130 PGKPPQSPCEPLTPPPCPACP--------PGPPGAPGAPGKPGSEGPPGPPGHDGPNGGP 181
Query: 610 XXXXXPDXXXXXGXP 566
P G P
Sbjct: 182 GQPGQPGPHGPNGHP 196
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 166 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 312
+D D+P + L L+ + E + V + ++ W D RL+WN
Sbjct: 65 HDPDAPGRWNYTL-LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 789 PGPXPGGXXRRGPX-PPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXXPEEG 613
PG P G GP PP PAG P P G P A G PA G
Sbjct: 173 PGS-PAGPSGPGPAGPPGPAGPAG-NDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
Query: 612 P 610
P
Sbjct: 231 P 231
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWN 312
E + ++ L +NW+D RLSWN
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWN 177
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 27.9 bits (59), Expect = 9.4
Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = +2
Query: 599 PGXXGPSSGXXXAGXXXPAXGXXXAXGGXXPXGXXG--XXXXAP--AGAXXRGGXGPRRX 766
PG GP+ AG P G G P G G AP AGA GG G
Sbjct: 243 PGPPGPAGNPGSAGASEP--GPAGPAGDAGPDGAPGNAGAPGAPGEAGAPGSGG-GCDHC 299
Query: 767 XPPGXGPG 790
PP PG
Sbjct: 300 PPPRTAPG 307
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 789 PGPXPGGXXRRGPX-PPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXXPEEG 613
PG P G GP PP PAG P P G P A G PA G
Sbjct: 173 PGS-PAGPSGPGPAGPPGPAGPAG-NDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
Query: 612 P 610
P
Sbjct: 231 P 231
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 789 PGPXPGGXXRRGPX-PPRXXAPAGAXXXXPXXPXGXXPPXAXXXPXAGHXXPAXXXPEEG 613
PG P G GP PP PAG P P G P A G PA G
Sbjct: 173 PGS-PAGPSGPGPAGPPGPAGPAG-NDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAG 230
Query: 612 P 610
P
Sbjct: 231 P 231
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 724 GGXXXXXPXPPGXXXPXGXAXAXGXXPXPRXXXAGGGPXXXXXPDXXXXXGXP 566
GG PPG P G A G P GGG P G P
Sbjct: 180 GGCKTCPAGPPGPPGPAGQAGRPGNDGQPGAPSFGGGVGAPGAPGPAGDAGSP 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,433,934
Number of Sequences: 27780
Number of extensions: 313337
Number of successful extensions: 1640
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -