Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_C16
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 80 2e-15
AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical ... 31 0.78
AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical ... 31 0.78
Z75526-7|CAE17729.1| 325|Caenorhabditis elegans Hypothetical pr... 31 1.4
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 30 1.8
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 29 4.1
AF016451-8|AAB66004.2| 354|Caenorhabditis elegans Serpentine re... 28 7.2
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 79.8 bits (188), Expect = 2e-15
Identities = 55/215 (25%), Positives = 92/215 (42%)
Frame = +2
Query: 143 PNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAADLLFEKAYAXYRVNSPKEALQTV 322
P E AF CK+V +QL + +AL + + + FEKAY YR + EA++ +
Sbjct: 40 PKETFAFKCKLVAQIQLSQYADALELIRKTPAHQMG-HVGFEKAYIHYRQDELDEAIKEL 98
Query: 323 DSAPELTPAXKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXX 502
++ + EL+AQ+ Y+ E YQ Y++Y LLKN +D+ DE +
Sbjct: 99 NTCDKDDVKALELKAQVFYKQENYQQAYDIYLYLLKNHSDD-SDELRRANFLAVQARLEA 157
Query: 503 XPTSELPQFDENTYELAYNSGSTLAMRGKYNEALSVLKRAEQACSESVIDDGGTXEXAKX 682
+ E++Y YN K +AL L++A + C +S D+ + +
Sbjct: 158 QGVKQAVAETEDSYSQLYNRACVEIEAEKLPQALESLEKALKTCRKSFEDEDREEDEIEE 217
Query: 683 XLXL*GSXKPYCLPXNKQGXRXXXLFTRTSXKDQP 787
L K Y L Q ++ + + P
Sbjct: 218 ELDSIRVQKAYVLQRMGQKAEALAIYEKVQAANHP 252
>AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical
protein H04D03.2b protein.
Length = 749
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 609 TDKASLYFPRIAKVLPELYANSYVFSSNCGSSD 511
T + S++FPR PE Y YV S+C S+
Sbjct: 281 TTQKSIFFPRDRDYPPEFYTEPYVVLSSCSESE 313
>AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical
protein H04D03.2a protein.
Length = 747
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 609 TDKASLYFPRIAKVLPELYANSYVFSSNCGSSD 511
T + S++FPR PE Y YV S+C S+
Sbjct: 281 TTQKSIFFPRDRDYPPEFYTEPYVVLSSCSESE 313
>Z75526-7|CAE17729.1| 325|Caenorhabditis elegans Hypothetical
protein C06H2.7 protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 185 LQLHNFKEALATLTNAKNSALAADLLFEKAYAXYRVNSPK-EALQTVDSAPELTPAXKEL 361
L + F E +AT+ N K+ + LLF + +R+N + A T S P + E
Sbjct: 197 LNIGKFDEMVATVNNIKDLRIRQQLLFFQLITIFRLNIARINASVTAASLPLIVECINEW 256
Query: 362 RA 367
RA
Sbjct: 257 RA 258
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 128 ILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNA-KNSALAADLLFEKAYAXYRVNSPK 304
+L+ P + + + C++ K A+ + +A K S+ +LLFE + Y+V +
Sbjct: 167 LLETQPWDASLYIYRAKCYVAEDKVKSAIHDMKHAAKLSSDNTELLFEMSELEYKVADVR 226
Query: 305 EALQTVDSAPELTPAXKE 358
++L ++ +L P K+
Sbjct: 227 DSLGSIRECLKLNPDHKK 244
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 173 VVCFLQLHN--FKEALATLTNAK-NSALAADLLFEKAYAXYRVNSPKEALQTVDSAPELT 343
++CF N F +AL N N +LA+ +L K +NSPK + + +DSA +L
Sbjct: 740 LICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPKCSEEDLDSAYKLI 799
Query: 344 PAXKELRAQILYRLE 388
++ YR+E
Sbjct: 800 CNEYDILKPFQYRIE 814
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 173 VVCFLQLHN--FKEALATLTNAK-NSALAADLLFEKAYAXYRVNSPKEALQTVDSAPELT 343
++CF N F +AL N N +LA+ +L K +NSPK + + +DSA +L
Sbjct: 460 LICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPKCSEEDLDSAYKLI 519
Query: 344 PAXKELRAQILYRLE 388
++ YR+E
Sbjct: 520 CNEYDILKPFQYRIE 534
>AF016451-8|AAB66004.2| 354|Caenorhabditis elegans Serpentine
receptor, class t protein65 protein.
Length = 354
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 269 KAYAXYRVNSPKEALQTVDSAPELTPAXKELRAQILYRL 385
K YA +++ + L T+ P++T +LR I Y+L
Sbjct: 59 KVYARFKIFKTYQTLSTLAILPKMTKFPSDLRENISYKL 97
>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical protein
F02C9.3 protein.
Length = 1064
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 248 LTLNSWHWLMLLEPP*SCGV 189
LT+++WHWLML+ S G+
Sbjct: 989 LTVHTWHWLMLVAQALSLGL 1008
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,019,093
Number of Sequences: 27780
Number of extensions: 254102
Number of successful extensions: 713
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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