Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_C15
(784 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 34 0.66
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 34 0.66
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 34 0.66
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 34 0.66
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 34 0.66
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 34 0.66
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 34 0.66
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 34 0.66
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 34 0.66
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 34 0.66
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.5
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.5
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.5
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.5
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.5
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.5
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.5
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.5
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 1057
Query: 713 PP 718
PP
Sbjct: 1058 PP 1059
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 730 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 789
Query: 713 PP 718
PP
Sbjct: 790 PP 791
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 1057
Query: 713 PP 718
PP
Sbjct: 1058 PP 1059
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 730 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 789
Query: 713 PP 718
PP
Sbjct: 790 PP 791
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 1057
Query: 713 PP 718
PP
Sbjct: 1058 PP 1059
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA TR+ N P +HP +H + F PG PP S S
Sbjct: 427 PSSPAQPPGLTRTRNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 486
Query: 713 PP 718
PP
Sbjct: 487 PP 488
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 444 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 503
Query: 713 PP 718
PP
Sbjct: 504 PP 505
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 444 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 503
Query: 713 PP 718
PP
Sbjct: 504 PP 505
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 1057
Query: 713 PP 718
PP
Sbjct: 1058 PP 1059
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 33.9 bits (74), Expect = 0.66
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTKKEFAPGXKPPXVTXXSISVSH 712
P SPA T+S N P +HP +H + F PG PP S S
Sbjct: 984 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTST 1043
Query: 713 PP 718
PP
Sbjct: 1044 PP 1045
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,830,005
Number of Sequences: 237096
Number of extensions: 2309038
Number of successful extensions: 5706
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5686
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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