Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_C07
(827 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 59 4e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 59 4e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 7e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 53 4e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 5e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 9e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 51 2e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 50 2e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 43 4e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 9e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 40 3e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.65
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.5
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 59.3 bits (137), Expect = 4e-11
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Frame = +1
Query: 79 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESKSTVRILADLQ 243
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 244 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 414
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 415 SCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQ 531
C+ + WP D+ CT S H ++
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSNE 186
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 59.3 bits (137), Expect = 4e-11
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESKSTVRILADLQMN 249
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 250 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 417
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 418 CIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQ 531
C+ S+ + +WP D C FGS +H ++
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEE 196
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.4 bits (135), Expect = 7e-11
Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 9/168 (5%)
Frame = +1
Query: 61 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESKST 219
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 220 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 393
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 394 VSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
+ G V + + +P D TC +FGS + Q D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 54.0 bits (124), Expect = 2e-09
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESKSTVRILADLQMNWIDKRLS 270
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 271 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKSLDIST 444
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 445 PISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
+ +P D C +FGS + +Q D
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 54.0 bits (124), Expect = 2e-09
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESKSTVRILADLQMNWIDKRLS 270
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 271 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSCIKSLDIST 444
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 445 PISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
+ +P D C +FGS + +Q D
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 196 NIRESKSTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
G Y V++NGS + + + +P D C +FGS + +Q D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 196 NIRESKSTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
G Y V+++GS + + M +P D C +FGS + +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 196 NIRESKSTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
G Y V+++GS + + M +P D C +FGS + +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 52.8 bits (121), Expect = 4e-09
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 9/162 (5%)
Frame = +1
Query: 79 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESKSTVRILAD 237
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 411
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 412 VSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
V + + +P D TC +FGS + Q D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.4 bits (120), Expect = 5e-09
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 7/149 (4%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESKSTVRILADLQMNW 252
N +++S ++D+LL YD PD V + + +R I E T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 253 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSCI 423
+D+RL++ G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 424 KSLDISTPISMQSXNWPNDMXTCTFRFGS 510
L I M N+P D C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 51.6 bits (118), Expect = 9e-09
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESKSTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 330
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 331 PDVVLLNAAATTAGDYALRAR----VSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTF 498
PD+VL N A G+Y +R + + NG V + + ++ +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 499 RFGSRMHXXDQ 531
+FGS DQ
Sbjct: 168 KFGSWTFNGDQ 178
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 196 NIRESKSTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
G Y V+++GS + + + +P D C +FGS + +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 196 NIRESKSTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
G Y V+++GS + + + +P D C +FGS + +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 196 NIRESKSTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
G Y V+++GS + + + +P D C +FGS + +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.8 bits (116), Expect = 2e-08
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESKSTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSCIKSLDIST 444
W E+G L V S+ +WRPD+VL NA A +A + + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 445 PISMQSXNWPNDMXTCTFRFGS 510
+ +P D TC +FGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 50.4 bits (115), Expect = 2e-08
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESKSTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKSLD 435
WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 436 ISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
+ + +P D +C +FGS + Q D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 50.0 bits (114), Expect = 3e-08
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Frame = +1
Query: 58 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHANIRESKSTVR 225
A+A++ + +++ LL TY+ E P ++ +V++ L L + K+ +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 226 IL-ADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 396
I L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 397 SNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGSRMHXXDQRD 537
NNG+ + + + +P D C +FGS + Q D
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.6 bits (113), Expect = 3e-08
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 210
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 211 KSTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 384
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 385 ---RARVSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGS 510
+A + + G V + + +P D TC +FGS
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.4 bits (110), Expect = 8e-08
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Frame = +1
Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESKSTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKSLD 435
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 436 ISTPISMQSXNWPNDMXTCTFRFGS 510
+ S+ +P D+ TC + GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 42.7 bits (96), Expect = 4e-06
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Frame = +1
Query: 94 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESKSTVRILADLQMNWID 258
++++++++LL Y+ P + VV + +R + E + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 259 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSCIKS 429
RLS+ S + ER+WRPD N + + R+S +G +
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 430 LDISTPISMQSXNWPNDMXTCTFRFGS 510
L I M+ N+P D +C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Frame = +1
Query: 106 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESKSTVRILADLQMNWIDKR 264
++D++L YD E+ D +V + L +R A I + K + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 265 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSV--SCI 423
L +N G T L + R+W PD+ N + + R+ NGSV S
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 424 KSLDISTPISMQSXNWPNDMXTCTFRFGS 510
SL +S P++++ +P D C+ R S
Sbjct: 154 ISLTLSCPMNLKL--YPLDRQVCSLRMAS 180
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.5 bits (93), Expect = 9e-06
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Frame = +1
Query: 160 IVVNLTLHLRHANIRESKSTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 336
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 337 VVLLNAAATTAGDYALRAR--VSNNGSVSCIKSLDISTPISMQSXNWPNDMXTCTFRFGS 510
+L N A + VS+ G V + + + +P D C ++ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.9 bits (89), Expect = 3e-05
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESKSTVRILADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E K + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 253 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 405
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 406 GSVSCIKSLDISTPISMQSXNWPNDMXTC 492
GS++ L I+ M +P D C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 1e-04
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESKSTVRILADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 253 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 405
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 406 GSVSCIKSLDISTPISMQSXNWPNDMXTC 492
GS++ L I+ M +P D C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.65
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Frame = +1
Query: 316 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSCIKSLDISTPISMQSXNWPNDMX 486
+ +WRPD NA + T + + + ++ + L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 487 TCTFRFGSRMHXXDQ 531
C + S H D+
Sbjct: 176 ECKLQMESLSHTTDE 190
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 1.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 686 GPPPGXPXXXPP 721
GPPPG P PP
Sbjct: 45 GPPPGGPPGAPP 56
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 303 PSAAAPFPCVPTQS 262
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,661
Number of Sequences: 438
Number of extensions: 4423
Number of successful extensions: 62
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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