Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_C06
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 100 3e-21
08_02_1483 - 27451391-27451794,27451883-27452387 38 0.010
03_01_0648 - 4749150-4749275,4749902-4749986,4750761-4750861,475... 33 0.38
05_07_0249 - 28659760-28659831,28660376-28660412,28660691-28660974 32 0.66
03_05_0521 + 25160245-25160883 30 2.0
12_02_0559 - 20462217-20462780 30 2.7
12_02_0558 - 20453998-20454561 30 2.7
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 30 2.7
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 29 4.7
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 29 4.7
01_01_1043 + 8228201-8228209,8228364-8228439,8228527-8228903 29 4.7
11_05_0077 - 18866707-18867334,18867410-18867555 29 6.2
01_06_1658 - 38954953-38955145,38955310-38955368,38955541-389555... 29 6.2
07_03_1618 + 28172191-28172601 28 8.1
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391... 28 8.1
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 99.5 bits (237), Expect = 3e-21
Identities = 73/202 (36%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Frame = +3
Query: 219 ENGVDPINGKELRVEDLXXXXXXXXXXXXXXSATSIPATLKSMQGEWDALMLHAFTQRQQ 398
++G P+ +EL ++D+ A SIP L Q EWDA+ML +F QQ
Sbjct: 4 DHGKCPVTKEELTMDDIVAVKTNKVVKPRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQ 63
Query: 399 LQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIA-APQAPHPTEXXXX 575
L TARQELSHALYQHDAACRVIARL KE AR LA + Q + A AP
Sbjct: 64 LHTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQIPASMAGAAPTAVVSNGK 123
Query: 576 XXXXXXXXXD-----------VVSRLQERATXLTQERKPRXRTLXXGLVAPXXIXAFLXL 722
D ++ L E T L+ RK R + L + I + +
Sbjct: 124 RAFEDEVGPDGKKIRPGINPVMIDELTECNTMLSAHRK--KRQVPPTLASIDAIERYTQI 181
Query: 723 ASXPGSSFXQXXGILSLEINPS 788
+S P GILS++I+PS
Sbjct: 182 SSHPLHK-TNKPGILSMDIHPS 202
>08_02_1483 - 27451391-27451794,27451883-27452387
Length = 302
Score = 37.9 bits (84), Expect = 0.010
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 467 PTHKGGDGGARGPRHAETAGRHCSTPST--TPHGGVSRQCGSNRHVCGRGVSSAGARHRT 640
P H G GG G RHA AG S+PST PHGG + GS+ GV++A A +
Sbjct: 227 PEHSSGGGGGMGGRHA-AAGEAGSSPSTAAAPHGG--GEGGSS------GVAAAAAAVSS 277
Query: 641 HAGTEAPXPHP 673
A P P P
Sbjct: 278 SAVVMDPYPTP 288
>03_01_0648 -
4749150-4749275,4749902-4749986,4750761-4750861,
4750933-4751191,4751382-4751434,4752828-4752990,
4753181-4754616
Length = 740
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 479 GGDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVS 616
G GGARG H +G S+P+++ G + GS+R V GR S
Sbjct: 87 GQQGGARGAIHVPLSGGFASSPASSTSAGSAPSPGSDRFV-GRSPS 131
>05_07_0249 - 28659760-28659831,28660376-28660412,28660691-28660974
Length = 130
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +2
Query: 422 KSCTVPTRRSVSCDSPTHKGGDGGARGPRHAETAG---RHCSTPSTTPHGGVSRQCGSN 589
+SC R + P G GG G R + G R P TP GG R CG++
Sbjct: 9 RSCRTDARARAA-GRPDLTPGGGGGSGARRSYGCGAGPRAAGWPDLTPGGGAKRSCGAD 66
>03_05_0521 + 25160245-25160883
Length = 212
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/63 (34%), Positives = 26/63 (41%)
Frame = +2
Query: 449 SVSCDSPTHKGGDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGA 628
S+SC S HKG GG G R A AG G + + V G G +AG
Sbjct: 18 SISCKSTRHKGRAGG--GGRAAAVAGAREPGKGAAVVAGARERVTA---VAGAGAPAAGV 72
Query: 629 RHR 637
R R
Sbjct: 73 RER 75
>12_02_0559 - 20462217-20462780
Length = 187
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 476 KGGDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 625
+GG GG AGR T P G R+ G R GRG ++ G
Sbjct: 89 RGGGGGGDAGGGDGAAGRR--TVEAAPAAGGGRRQGRERRTAGRGAAAVG 136
>12_02_0558 - 20453998-20454561
Length = 187
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 476 KGGDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 625
+GG GG AGR T P G R+ G R GRG ++ G
Sbjct: 89 RGGGGGGDAGGGDGAAGRR--TVEAAPAAGGGRRQGRERRTAGRGAAAVG 136
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2
Query: 543 GVLQCRPAVSAWRGPLAPPSP 481
G+L C P VSA RGP+ PP P
Sbjct: 873 GILPC-PPVSAHRGPVIPPPP 892
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -3
Query: 317 GTWRFWLYYRWCFDLNKVLNSQLLAVNRIHAIFYYVLLNDSPF 189
G +RFWL + F + + +L +H FYYVL ++ +
Sbjct: 151 GHYRFWLLWNSAFRVT--YSRMMLYTTPVHGTFYYVLRYEAEY 191
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 111 KMSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDL 269
++ YC G+VF+ I YI + G P+ G L+ EDL
Sbjct: 36 RLPFYCCALTFLPFEDPVCTADGSVFDLMSIIPYIKKFGKHPVTGTPLKQEDL 88
>01_01_1043 + 8228201-8228209,8228364-8228439,8228527-8228903
Length = 153
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 4/25 (16%)
Frame = -1
Query: 403 CNC----CLCVKACNIRASHSPCML 341
C C C CVK C HSPC L
Sbjct: 95 CQCKEAECACVKVCAASCHHSPCSL 119
>11_05_0077 - 18866707-18867334,18867410-18867555
Length = 257
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +2
Query: 446 RSVSCDSPTHKGGDGGARGPR--HAETAGRHCSTPSTTPHGGVSRQCGSNR 592
R+V+ P GG GG G T G C+ P H G G+ R
Sbjct: 24 RAVAVPLPAAGGGGGGGGGEAGVRRRTRGTWCAAPDAVAHRGEDPGVGARR 74
>01_06_1658 -
38954953-38955145,38955310-38955368,38955541-38955587,
38956264-38956294,38956507-38956569,38956760-38956855,
38956939-38957022,38957112-38957204,38957505-38957582,
38957938-38958028,38958108-38958208,38958303-38959121,
38959216-38959266
Length = 601
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/75 (24%), Positives = 26/75 (34%)
Frame = -1
Query: 742 EDPGXDARXRNAXXCXGATSPSXRVRXRGFRSCVSXVARSCRRDTTSADMPVAPALPADA 563
E P DA C G P+ + + A + + D PV PADA
Sbjct: 83 EVPSADATAAGDALCCGGVEPATLTAVSDLAATTADAAVTDAAERALLDAPVPTTFPADA 142
Query: 562 SVGCGAWGAAMPACG 518
S A+ + + G
Sbjct: 143 SDAEAAFARLIDSLG 157
>07_03_1618 + 28172191-28172601
Length = 136
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/85 (27%), Positives = 30/85 (35%), Gaps = 5/85 (5%)
Frame = +2
Query: 476 KGGDGGARGPRHAETAGRHCSTPSTTPH---GGVSRQCGSNRHVCGR--GVSSAGARHRT 640
+GG GG R T G S P GG + + + + G GVS RH
Sbjct: 11 QGGGGGERREVDRTTTGSAISVPEINQRNFAGGSAMKEDDDEDIGGLEDGVSDEDGRHCA 70
Query: 641 HAGTEAPXPHPXRXTGGXXAXXSIP 715
+ T P R G S+P
Sbjct: 71 QSLTSISPPQSNRVIAGQPLVGSLP 95
>02_05_0867 -
32338313-32338331,32338372-32338496,32338972-32339186,
32340043-32340086,32340187-32340548,32341357-32341650
Length = 352
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1
Query: 640 SXVARSCRRDTTSADMPVAPALPADASVGCGA 545
S ARS T PV+PA PA +VG GA
Sbjct: 19 SSAARSFATGATRFPSPVSPASPAPGAVGGGA 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,558,557
Number of Sequences: 37544
Number of extensions: 456087
Number of successful extensions: 1700
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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