Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_C06
(847 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018698-1|AAH18698.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 229 7e-60
BC018665-1|AAH18665.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 229 7e-60
BC008719-1|AAH08719.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 229 7e-60
AJ131186-1|CAB51857.1| 504|Homo sapiens nuclear matrix protein ... 229 7e-60
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 36 0.24
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 36 0.24
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 36 0.24
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 36 0.24
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 36 0.24
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 36 0.24
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 36 0.24
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot... 35 0.43
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein. 35 0.43
AB104446-1|BAC57496.1| 493|Homo sapiens hornerin protein. 35 0.43
AL513303-2|CAH74050.1| 281|Homo sapiens core promoter element b... 34 0.75
AL450322-2|CAH71011.1| 281|Homo sapiens core promoter element b... 34 0.75
BC057819-1|AAH57819.1| 156|Homo sapiens chromosome 1 open readi... 33 1.3
U51869-2|AAB94793.1| 215|Homo sapiens Bcd orf2 protein. 32 2.3
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.3
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 32 2.3
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 32 2.3
BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein. 32 2.3
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 32 2.3
AB032986-1|BAA86474.1| 351|Homo sapiens KIAA1160 protein protein. 31 4.0
D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein. 31 5.3
AK057320-1|BAB71425.1| 268|Homo sapiens protein ( Homo sapiens ... 31 5.3
AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein. 31 5.3
AL929472-10|CAH70085.1| 156|Homo sapiens chromosome 1 open read... 31 6.9
AK127381-1|BAC86950.1| 156|Homo sapiens protein ( Homo sapiens ... 31 6.9
AF533682-1|AAQ10304.1| 133|Homo sapiens IL1RAPL1-dystrophin fus... 31 6.9
AK128822-1|BAC87623.1| 555|Homo sapiens protein ( Homo sapiens ... 30 9.2
AK125088-1|BAC86048.1| 221|Homo sapiens protein ( Homo sapiens ... 30 9.2
AK097414-1|BAC05041.1| 455|Homo sapiens protein ( Homo sapiens ... 30 9.2
AF070418-1|AAC23685.1| 517|Homo sapiens embryonic ectoderm deve... 30 9.2
>BC018698-1|AAH18698.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 229 bits (561), Expect = 7e-60
Identities = 126/250 (50%), Positives = 152/250 (60%), Gaps = 7/250 (2%)
Frame = +3
Query: 114 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 293
MSL C+ISN SP S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 294 XXXXXXSATSIPATLKSMQGEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 473
SATSIPA LK++Q EWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 474 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 632
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 633 TXLTQERKPRXRTLXXGLVAPXXIXAFLXLASXPGSSFXQXXGILSLEINPSDPXKX*XG 812
T LT ERK R +T+ LV P + + +AS G GIL+L++ PSD K G
Sbjct: 181 TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG 240
Query: 813 GKXXNPXXFN 842
G N F+
Sbjct: 241 GADKNVVVFD 250
>BC018665-1|AAH18665.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 229 bits (561), Expect = 7e-60
Identities = 126/250 (50%), Positives = 152/250 (60%), Gaps = 7/250 (2%)
Frame = +3
Query: 114 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 293
MSL C+ISN SP S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 294 XXXXXXSATSIPATLKSMQGEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 473
SATSIPA LK++Q EWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 474 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 632
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 633 TXLTQERKPRXRTLXXGLVAPXXIXAFLXLASXPGSSFXQXXGILSLEINPSDPXKX*XG 812
T LT ERK R +T+ LV P + + +AS G GIL+L++ PSD K G
Sbjct: 181 TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG 240
Query: 813 GKXXNPXXFN 842
G N F+
Sbjct: 241 GADKNVVVFD 250
>BC008719-1|AAH08719.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 229 bits (561), Expect = 7e-60
Identities = 126/250 (50%), Positives = 152/250 (60%), Gaps = 7/250 (2%)
Frame = +3
Query: 114 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 293
MSL C+ISN SP S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 294 XXXXXXSATSIPATLKSMQGEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 473
SATSIPA LK++Q EWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 474 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 632
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 633 TXLTQERKPRXRTLXXGLVAPXXIXAFLXLASXPGSSFXQXXGILSLEINPSDPXKX*XG 812
T LT ERK R +T+ LV P + + +AS G GIL+L++ PSD K G
Sbjct: 181 TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG 240
Query: 813 GKXXNPXXFN 842
G N F+
Sbjct: 241 GADKNVVVFD 250
>AJ131186-1|CAB51857.1| 504|Homo sapiens nuclear matrix protein
NMP200 protein.
Length = 504
Score = 229 bits (561), Expect = 7e-60
Identities = 126/250 (50%), Positives = 152/250 (60%), Gaps = 7/250 (2%)
Frame = +3
Query: 114 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 293
MSL C+ISN SP S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 294 XXXXXXSATSIPATLKSMQGEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 473
SATSIPA LK++Q EWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 474 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 632
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 633 TXLTQERKPRXRTLXXGLVAPXXIXAFLXLASXPGSSFXQXXGILSLEINPSDPXKX*XG 812
T LT ERK R +T+ LV P + + +AS G GIL+L++ PSD K G
Sbjct: 181 TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG 240
Query: 813 GKXXNPXXFN 842
G N F+
Sbjct: 241 GADKNVVVFD 250
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2480
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHAETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2464
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHAETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2448
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHAETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2432
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHAETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2416
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHAETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2400
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHAETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-like
protein 1 protein.
Length = 2464
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHAETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor protein.
Length = 2850
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S RH G G SS G H++ +G
Sbjct: 884 GSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSS-GFGHKSSSG 939
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1119 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1175
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1589 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1645
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 2585
Score = 33.5 bits (73), Expect = 0.99
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2059 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSG 2115
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = +2
Query: 509 HAETAGRHCSTPSTTP-HG----GVSRQCGSNRHVCGRGVSSAGARHRTHAGTEAPXPH 670
HA GRH S +P HG G + RH G G SS+ RH + +G + H
Sbjct: 876 HASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGH 934
>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
Length = 2850
Score = 34.7 bits (76), Expect = 0.43
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S RH G G SS G H++ +G
Sbjct: 884 GSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSS-GFGHKSSSG 939
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1119 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1175
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1589 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1645
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 2585
Score = 33.5 bits (73), Expect = 0.99
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2059 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSG 2115
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = +2
Query: 509 HAETAGRHCSTPSTTP-HG----GVSRQCGSNRHVCGRGVSSAGARHRTHAGTEAPXPH 670
HA GRH S +P HG G + RH G G SS+ RH + +G + H
Sbjct: 876 HASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGH 934
>AB104446-1|BAC57496.1| 493|Homo sapiens hornerin protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.43
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H++ +PS HG G R S +H G G SS H + +G
Sbjct: 172 GSGSGQSPGHSQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 228
>AL513303-2|CAH74050.1| 281|Homo sapiens core promoter element
binding protein protein.
Length = 281
Score = 33.9 bits (74), Expect = 0.75
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 497 RGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHV 598
RGPR A GRHC P+ G CG R +
Sbjct: 230 RGPRRAAAGGRHCIAPALEGAGPGCTGCGQGRQI 263
>AL450322-2|CAH71011.1| 281|Homo sapiens core promoter element
binding protein protein.
Length = 281
Score = 33.9 bits (74), Expect = 0.75
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 497 RGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHV 598
RGPR A GRHC P+ G CG R +
Sbjct: 230 RGPRRAAAGGRHCIAPALEGAGPGCTGCGQGRQI 263
>BC057819-1|AAH57819.1| 156|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 156
Score = 33.1 bits (72), Expect = 1.3
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAG--TE 655
G G RGPR R +TP+ P G +RQ + R G ++A HR+ G T
Sbjct: 10 GGGCRRGPREGGAGARREATPTAAPGG--ARQAAAGRG--GAAAAAAPGHHRSLRGDVTA 65
Query: 656 APXPHP 673
A P P
Sbjct: 66 AGPPAP 71
>U51869-2|AAB94793.1| 215|Homo sapiens Bcd orf2 protein.
Length = 215
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 497 RGPRHAETAGRHCSTPSTTPHGGVSRQCGSNR 592
RGPR A GRHC P+ G CG R
Sbjct: 124 RGPRRAVAGGRHCIAPALEGAGPGCTGCGQGR 155
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHAETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 830 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 875
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHAETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 811 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 856
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHAETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 711 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 756
>BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein.
Length = 208
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHAETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 100 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 145
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHAETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 830 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 875
>AB032986-1|BAA86474.1| 351|Homo sapiens KIAA1160 protein protein.
Length = 351
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 443 RRSVSCDSPTHKGGDGGARGPRHAETAGRHCSTPSTTPHGGVSRQC 580
RR + C S T G A PR S P+T+P G S +C
Sbjct: 300 RRLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRC 345
>D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein.
Length = 962
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/70 (28%), Positives = 23/70 (32%)
Frame = +2
Query: 464 SPTHKGGDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTH 643
S H GG RG G S GG ++ S HV G G
Sbjct: 881 SREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQD 940
Query: 644 AGTEAPXPHP 673
G+ P PHP
Sbjct: 941 RGSRVPHPHP 950
>AK057320-1|BAB71425.1| 268|Homo sapiens protein ( Homo sapiens
cDNA FLJ32758 fis, clone TESTI2001792. ).
Length = 268
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 494 ARGPRHA-ETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTEAPXPH 670
AR P A ETAG HC P ++ S+ G SAG R H GT A
Sbjct: 168 ARSPNPACETAGIHCFKPIRLESFVLAAPKASHSSALSTGSVSAGKVGRPHRGTAA---G 224
Query: 671 PXRXTGG 691
P + GG
Sbjct: 225 PCKTQGG 231
>AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein.
Length = 953
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/70 (28%), Positives = 23/70 (32%)
Frame = +2
Query: 464 SPTHKGGDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTH 643
S H GG RG G S GG ++ S HV G G
Sbjct: 872 SREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQD 931
Query: 644 AGTEAPXPHP 673
G+ P PHP
Sbjct: 932 RGSRVPHPHP 941
>AL929472-10|CAH70085.1| 156|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 156
Score = 30.7 bits (66), Expect = 6.9
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAG--TE 655
G G RGPR R +TP+ P G +R + R G ++A HR+ G T
Sbjct: 10 GGGCRRGPREGGAGARREATPTAAPGG--ARPAAAGRG--GAAAAAAPGHHRSLRGDVTA 65
Query: 656 APXPHP 673
A P P
Sbjct: 66 AGPPAP 71
>AK127381-1|BAC86950.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ45459 fis, clone BRSTN2010416. ).
Length = 156
Score = 30.7 bits (66), Expect = 6.9
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 482 GDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAG--TE 655
G G RGPR R +TP+ P G +R + R G ++A HR+ G T
Sbjct: 10 GGGCRRGPREGGAGARREATPTAAPGG--ARPAAAGRG--GAAAAAAPGHHRSLRGDVTA 65
Query: 656 APXPHP 673
A P P
Sbjct: 66 AGPPAP 71
>AF533682-1|AAQ10304.1| 133|Homo sapiens IL1RAPL1-dystrophin fusion
protein protein.
Length = 133
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/66 (22%), Positives = 34/66 (51%)
Frame = +3
Query: 318 TSIPATLKSMQGEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAR 497
T + T++ +Q +WD + H +RQQL ++ + L + A +V+ + ++ + +
Sbjct: 61 TELTVTVERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWK 120
Query: 498 EALATL 515
E T+
Sbjct: 121 EGPYTV 126
>AK128822-1|BAC87623.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ46108 fis, clone TESTI2030519. ).
Length = 555
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 479 GGDGGARGPRHAET-AGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTE 655
G G GP + AG P GG R+CG R CG G R R G E
Sbjct: 297 GAGGEDVGPGGEDVGAGGEDVGPGGEDAGGRRRRCGGRRRRCGARRRRCGGRRRRCGGQE 356
>AK125088-1|BAC86048.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ43098 fis, clone CTONG1000488. ).
Length = 221
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 581 GSNRHVCGRGVSSAGARHRTHAGTEAPXP 667
G R CG S A ARHR H+ T P P
Sbjct: 182 GPGRPHCGSCSSPAAARHRVHSLTHLPPP 210
>AK097414-1|BAC05041.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ40095 fis, clone TESTI2003940, weakly similar to
EBNA-1 NUCLEAR PROTEIN. ).
Length = 455
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 479 GGDGGARGPRHAET-AGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTE 655
G G GP + AG P GG R+CG R CG G R R G E
Sbjct: 294 GAGGEDVGPGGEDVGAGGEDVGPGGEDAGGRRRRCGGRRRRCGARRRRCGGRRRRCGGQE 353
>AF070418-1|AAC23685.1| 517|Homo sapiens embryonic ectoderm
development protein protein.
Length = 517
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = +2
Query: 437 PTRRSVSCDSPTHKGGDGGARGPRHAETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVS 616
P R CDS GG GG G A ++GR C T G R++ R VS
Sbjct: 27 PRRLGAICDSG---GGGGGGGGGNFAASSGRACLTAVWRRPRPRQEPGGRRRNMSEREVS 83
Query: 617 SAGA 628
+A A
Sbjct: 84 TAPA 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,107,955
Number of Sequences: 237096
Number of extensions: 2329027
Number of successful extensions: 7152
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 6419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7129
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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