Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_B24
(793 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 26 0.46
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 25 0.81
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 25 1.1
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 25 1.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.5
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 2.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 4.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 5.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.7
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 22 7.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 7.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 7.5
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 9.9
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 25.8 bits (54), Expect = 0.46
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 514 SVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRI 657
S + L R + N Y ++ + LS++ L+ Q+ WF N R +I
Sbjct: 28 SAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQNKRAKI 75
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 25.0 bits (52), Expect = 0.81
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 556 NAYPSDAEKIALSQEANLSVLQVCNWFINARRRI 657
N Y ++ + LS++ L+ Q+ WF N R +I
Sbjct: 42 NRYLTERRRQQLSRDLGLNEAQIKIWFQNKRAKI 75
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +1
Query: 544 DHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPEM 669
+ YN Y + +I ++ L+ Q+ WF N R ++ E+
Sbjct: 26 EFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 67
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +1
Query: 544 DHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPEMIRREG 684
+ YN Y + +I ++ L+ Q+ WF N R + E R G
Sbjct: 26 EFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENARATG 72
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.4 bits (48), Expect = 2.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 217 VSHKNSATGPKWHSNTDVT*GN*PEKSSGYARVANRQQSSSPGVRNRFPST 369
+S +N+ +SNT + ++SSG + N +S S G R PST
Sbjct: 5 ISTENAKVSDSGYSNTCSN--SQSQRSSGSSISRNSNRSESSGYCGRRPST 53
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 23.4 bits (48), Expect = 2.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 217 VSHKNSATGPKWHSNTDVT*GN*PEKSSGYARVANRQQSSSPGVRNRFPST 369
+S +N+ +SNT + ++SSG + N +S S G R PST
Sbjct: 5 ISTENAKVSDSGYSNTCSN--SQSQRSSGSSISRNSNRSESSGYCGRRPST 53
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +1
Query: 544 DHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 654
+ YN Y + +I ++ L+ Q+ WF N R +
Sbjct: 288 EFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 324
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/34 (26%), Positives = 15/34 (44%)
Frame = +1
Query: 118 YVLKKSNSCAQWSRTKTKCLHGLSDQLCYLPRPV 219
+ L N C +WS K++ + L PR +
Sbjct: 359 FKLMLPNCCGKWSSQKSEPRRSIYSSLLRYPRSI 392
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 388 ESGTDGEADRSRRQTILHGVSGMQPQ 465
E G+ G S +LHG+ PQ
Sbjct: 175 EPGSTGTTTTSTGTRLLHGILSQHPQ 200
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/58 (18%), Positives = 29/58 (50%)
Frame = +1
Query: 481 IRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 654
++++R + ++ L++ + +N Y + +I ++ L+ Q+ WF N R +
Sbjct: 8 VKRQRTSYTRYQTLELEK---EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 62
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 465 LGLHAGDSVEDGLPARP 415
LG+ A DS E+ L ARP
Sbjct: 36 LGIWADDSDEEELSARP 52
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +1
Query: 295 SSGYARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSR 423
SS R +R + +R+ + D N DGE SR
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSR 255
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +1
Query: 295 SSGYARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSR 423
SS R +R + +R+ + D N DGE SR
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSR 255
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +1
Query: 295 SSGYARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSR 423
SS R +R + +R+ + D N DGE SR
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSR 255
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +1
Query: 295 SSGYARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSR 423
SS R +R + +R+ + D N DGE SR
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSR 255
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +1
Query: 295 SSGYARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSR 423
SS R +R + +R+ + D N DGE SR
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSR 255
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 87 C*DTVLSNVILCTEKI*QLCSV 152
C V +++LCT I LC++
Sbjct: 111 CDSWVSLDILLCTASILSLCAI 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,526
Number of Sequences: 438
Number of extensions: 4570
Number of successful extensions: 23
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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