Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_B18
(853 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 49 6e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 43 3e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 43 4e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 7e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 1e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 41 2e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 39 5e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 31 0.010
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 0.67
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.88
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.88
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.88
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.88
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 25 0.88
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 25 0.88
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 25 0.88
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 25 0.88
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.88
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 0.88
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.88
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.88
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 0.88
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 1.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 24 2.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 24 2.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 4.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 48.8 bits (111), Expect = 6e-08
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Frame = +2
Query: 86 LML*LDAAECENATSLSLMIDSLLATYDRDSPPXSK----IVVNLTLHLRHA---NXRES 244
++L L A C + D LL+ Y+R P S +VV L L L N ++
Sbjct: 6 IILILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQ 65
Query: 245 ESTVRIQADLQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLLNPA 391
T + L+ W D + W+ E+G T L V SE +W PD+VL N A
Sbjct: 66 ILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 46.8 bits (106), Expect = 3e-07
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPXSKIV--VNLTLHLRHANXRESESTVRIQADLQ 277
C++ TS S + L YDRD P K ++ L ++H N E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVL 379
+ W LTW + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNPA-ATTAGDY 412
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 413 ALXARVSNNGSXSWI 457
V++NGS ++
Sbjct: 88 QTSVVVTHNGSCLYV 102
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNPA-ATTAGDY 412
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A G Y
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 155
Query: 413 ALXARVSNNGSXSWI 457
V++NGS ++
Sbjct: 156 QTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNPA-ATTAGDY 412
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A G Y
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 155
Query: 413 ALXARVSNNGSXSWI 457
V++NGS ++
Sbjct: 156 QTNVVVTHNGSCLYV 170
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNPA-ATTAGDY 412
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 413 ALXARVSNNGSXSWI 457
V+++GS ++
Sbjct: 88 QTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNPA-ATTAGDY 412
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 413 ALXARVSNNGSXSWI 457
V+++GS ++
Sbjct: 88 QTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNPA-ATTAGDY 412
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 413 ALXARVSNNGSXSWI 457
V+++GS ++
Sbjct: 88 QTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNPA-ATTAGDY 412
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 413 ALXARVSNNGSXSWI 457
V+++GS ++
Sbjct: 88 QTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNPA-ATTAGDY 412
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 413 ALXARVSNNGSXSWI 457
V+++GS ++
Sbjct: 88 QTSVVVTHDGSCLYV 102
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 43.2 bits (97), Expect = 3e-06
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRDSPPXSKIVVNLTLHLR-------HANXRESESTVRIQAD 271
C + D LL+ Y++ P + LT+ ++ N + T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 272 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLLNPA-ATTAGDYALXARVSNNGS 445
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 446 XSW 454
W
Sbjct: 137 VEW 139
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 42.7 bits (96), Expect = 4e-06
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPXSKIVVNLTLHLRHANXRESESTVRIQAD-----LQMNWIDKRLT 304
+ D LL+ Y+R P LT+ L + E ++ Q ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNPAATTAGDYAL----XARVSNNGSXSW 454
WN E+G L V SE +W PD+VL N A G+Y + A + G SW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.9 bits (94), Expect = 7e-06
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 272 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLLNPA-ATTAGDYALXARVSNNGS 445
L++ W D + WN ++G L + RLW+PDV++ N A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 446 XSWI 457
++
Sbjct: 136 CLYV 139
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.5 bits (93), Expect = 1e-05
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPXS----KIVVNLTLHLRH---ANXRESESTVRIQADLQMNWIDKR 298
+ D LL+ Y+R P ++ V + L L N + T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 299 LTWNAGEWG-CSTWLVSSERLWRPDVVLLNPA 391
L WN ++G T V SE +W PD+VL N A
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +2
Query: 167 DRDSPPXSKIVVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLTWNAGEW-GCSTWLV 343
+ S P + +V L+LH + E + + W D L WNA E+ G V
Sbjct: 25 ENSSQPLA-VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRV 82
Query: 344 SSERLWRPDVVLLNPAATTAGDYALXAR--VSNNGSXSWI 457
R+WRPD +L N A + VS+ G W+
Sbjct: 83 PYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.3 bits (90), Expect = 2e-05
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 272 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLLNPA-ATTAGDYALXARVSNNGS 445
++ +W D +L W E+G L V S+ +WRPD+VL N A A A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 446 XSW 454
W
Sbjct: 141 VEW 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.5 bits (88), Expect = 4e-05
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 272 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLLNPA 391
++ +W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPX---SKIVVNLTLHLRHANX-RESESTVRIQADLQMNW 286
N +++S ++D+LL YD P V + + +R E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLTWNAGEWGCSTWLVSSERLWRPDVVLLN 385
+D+RL + G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.1 bits (87), Expect = 5e-05
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANXRESESTVRIQADLQMNWIDKRLTWNAGEWG-CSTWLVSSERLWR 364
K+ VN L ++ N E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNPA-ATTAGDYALXARVSNNGSXSWI 457
PD+VL N A Y + NG W+
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLWV 142
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.010
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRDSPPX----SKIVVNLTLHLRHANX-RESESTVRIQADLQMNWID 292
++++++++LL Y+ + P + VV + +R E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLTWNAGEWGCSTWLVSSERLWRPDVVLLN 385
RL++ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.4 bits (53), Expect = 0.67
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -2
Query: 174 SRSYVARSESIMRDSDVAFSHSAASSYSIK*GXTGNKNNISRLTFYDN*SIEXIPSPV 1
SR R S R+ + S S +YS N NN ++ +Y+ IE IP PV
Sbjct: 67 SRDRTERERS--REPKIISSLSNNYNYSNYNNYNNNYNNYNKKLYYNINYIEQIPVPV 122
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 103 NNNNYKKLQYYNINYIEQIPIPV 125
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 103 NNNNYKKLQYYNINYIEQIPIPV 125
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 103 NNNNYKKLQYYNINYIEQIPIPV 125
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 103 NNNNYKKLQYYNINYIEQIPIPV 125
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPV 115
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPV 115
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPV 115
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPV 115
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 314 NNNNYKKLQYYNINYIEQIPVPV 336
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 325 NNNNYKKLQYYNINYIEQIPVPV 347
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 325 NNNNYKKLQYYNINYIEQIPVPV 347
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 314 NNNNYKKLQYYNINYIEQIPVPV 336
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN +L +Y+ IE IP PV
Sbjct: 326 NNNNYKKLQYYNINYIEQIPVPV 348
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN ++ +Y+ +IE IP PV
Sbjct: 104 NNNNYNKKLYYNIINIEQIPVPV 126
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN ++ +Y+ +IE IP PV
Sbjct: 104 NNNNYNKKLYYNIINIEQIPVPV 126
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 111 SAASSYSIK*GXTGNKNNISRLTFYDN*SIEXIPSPV 1
S +++Y N NN ++ +Y+ IE IP PV
Sbjct: 84 SLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPV 120
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 111 SAASSYSIK*GXTGNKNNISRLTFYDN*SIEXIPSPV 1
S +++Y N NN ++ +Y+ IE IP PV
Sbjct: 322 SLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPV 358
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN ++ +Y+ IE IP PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPV 122
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN ++ +Y+ IE IP PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPV 122
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN ++ +Y+ IE IP PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPV 122
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 69 NKNNISRLTFYDN*SIEXIPSPV 1
N NN ++ +Y+ IE IP PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPV 122
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 4.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 75 TGNKNNISRLTFYDN*SIEXIPSPV 1
T + NN ++ +Y+ +IE IP PV
Sbjct: 322 TIHNNNYNKKLYYNIINIEQIPVPV 346
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.2
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +3
Query: 714 VREGSPVXXGXXXRXAXXPASGRPXXXXGXGLXPLHSLAGGPXLPP 851
V + SPV PA G+ G + P+ +++ +PP
Sbjct: 386 VSQVSPVSMSALVSAVRSPAGGQLPPSAGAPMPPIPNMSNMSGMPP 431
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,640
Number of Sequences: 438
Number of extensions: 3518
Number of successful extensions: 66
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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