Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_FL5_B10
         (825 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   327   1e-89
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   326   2e-89
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   326   2e-89
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   297   9e-81
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   297   9e-81
AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD...   242   5e-64
AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC...   206   3e-53
AY089412-1|AAL90150.1|  249|Drosophila melanogaster AT23505p pro...    32   0.83 
AY061453-1|AAL29001.1|  985|Drosophila melanogaster LD39136p pro...    32   0.83 
AE013599-1040|AAF58831.2|  985|Drosophila melanogaster CG18011-P...    32   0.83 

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  327 bits (803), Expect = 1e-89
 Identities = 144/197 (73%), Positives = 166/197 (84%)
 Frame = +1

Query: 4   WHFSLRLSSSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYK 183
           + F+    + MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYK
Sbjct: 2   FRFTRLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYK 61

Query: 184 AGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHM 363
           AGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+
Sbjct: 62  AGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHL 121

Query: 364 SEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKL 543
           SE+CRRRFYKNWY             W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L
Sbjct: 122 SEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRL 181

Query: 544 LKQRQKKAHIMEIQLNG 594
           +KQRQKKAH+MEIQLNG
Sbjct: 182 IKQRQKKAHVMEIQLNG 198



 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +2

Query: 557 KRRLTLWKSNLTGGTIEDKVKWAREHLEKPIPVXSVFAQDEMIDCIGVTXGKGYKGVPSP 736
           +++  + +  L GG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVT GKG+KGV S 
Sbjct: 186 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSR 245

Query: 737 LGXQXSYPVRXTRGL*ESCLPLEAWAPSR 823
              +   P +  +GL      + AW PSR
Sbjct: 246 WHTK-KLPRKTHKGL-RKVACIGAWHPSR 272


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  326 bits (801), Expect = 2e-89
 Identities = 143/187 (76%), Positives = 162/187 (86%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
           NWY             W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 574 MEIQLNG 594
           MEIQLNG
Sbjct: 181 MEIQLNG 187



 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +2

Query: 557 KRRLTLWKSNLTGGTIEDKVKWAREHLEKPIPVXSVFAQDEMIDCIGVTXGKGYKGVPSP 736
           +++  + +  L GG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVT GKG+KGV S 
Sbjct: 175 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSR 234

Query: 737 LGXQXSYPVRXTRGL*ESCLPLEAWAPSR 823
              +   P +  +GL      + AW PSR
Sbjct: 235 WHTK-KLPRKTHKGL-RKVACIGAWHPSR 261


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  326 bits (801), Expect = 2e-89
 Identities = 143/187 (76%), Positives = 162/187 (86%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
           NWY             W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 574 MEIQLNG 594
           MEIQLNG
Sbjct: 181 MEIQLNG 187



 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +2

Query: 557 KRRLTLWKSNLTGGTIEDKVKWAREHLEKPIPVXSVFAQDEMIDCIGVTXGKGYKGVPSP 736
           +++  + +  L GG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVT GKG+KGV S 
Sbjct: 175 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSR 234

Query: 737 LGXQXSYPVRXTRGL*ESCLPLEAWAPSR 823
              +   P +  +GL      + AW PSR
Sbjct: 235 WHTK-KLPRKTHKGL-RKVACIGAWHPSR 261


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  297 bits (730), Expect = 9e-81
 Identities = 130/174 (74%), Positives = 149/174 (85%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 432
           EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY          
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120

Query: 433 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNG 594
              W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNG
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNG 174



 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +2

Query: 557 KRRLTLWKSNLTGGTIEDKVKWAREHLEKPIPVXSVFAQDEMIDCIGVTXGKGYKGVPSP 736
           +++  + +  L GG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVT GKG+KGV S 
Sbjct: 162 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSR 221

Query: 737 LGXQXSYPVRXTRGL*ESCLPLEAWAPSR 823
              +   P +  +GL      + AW PSR
Sbjct: 222 WHTK-KLPRKTHKGL-RKVACIGAWHPSR 248


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  297 bits (730), Expect = 9e-81
 Identities = 130/174 (74%), Positives = 149/174 (85%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 432
           EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY          
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120

Query: 433 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNG 594
              W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNG
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNG 174



 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +2

Query: 557 KRRLTLWKSNLTGGTIEDKVKWAREHLEKPIPVXSVFAQDEMIDCIGVTXGKGYKGVPSP 736
           +++  + +  L GG+IEDKVKWAREHLEKPI V +VF QDEMIDC+GVT GKG+KGV S 
Sbjct: 162 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSR 221

Query: 737 LGXQXSYPVRXTRGL*ESCLPLEAWAPSR 823
              +   P +  +GL      + AW PSR
Sbjct: 222 WHTK-KLPRKTHKGL-RKVACIGAWHPSR 248


>AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD,
           isoform D protein.
          Length = 161

 Score =  242 bits (592), Expect = 5e-64
 Identities = 105/123 (85%), Positives = 114/123 (92%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 NWY 402
           NWY
Sbjct: 121 NWY 123


>AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC,
           isoform C protein.
          Length = 125

 Score =  206 bits (503), Expect = 3e-53
 Identities = 90/108 (83%), Positives = 99/108 (91%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
           EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108


>AY089412-1|AAL90150.1|  249|Drosophila melanogaster AT23505p
           protein.
          Length = 249

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 559 KKAHIMEIQLNGWYHRGQSEMGQRTSGETYPCRXC 663
           KK +   +   G+YH+ + E  Q+  G++Y C  C
Sbjct: 68  KKRYSCSVCQKGFYHKSEMEAHQKLHGQSYSCEQC 102


>AY061453-1|AAL29001.1|  985|Drosophila melanogaster LD39136p
           protein.
          Length = 985

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 559 KKAHIMEIQLNGWYHRGQSEMGQRTSGETYPCRXC 663
           KK +   +   G+YH+ + E  Q+  G++Y C  C
Sbjct: 804 KKRYSCSVCQKGFYHKSEMEAHQKLHGQSYSCEQC 838


>AE013599-1040|AAF58831.2|  985|Drosophila melanogaster CG18011-PA
           protein.
          Length = 985

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 559 KKAHIMEIQLNGWYHRGQSEMGQRTSGETYPCRXC 663
           KK +   +   G+YH+ + E  Q+  G++Y C  C
Sbjct: 804 KKRYSCSVCQKGFYHKSEMEAHQKLHGQSYSCEQC 838


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,684,510
Number of Sequences: 53049
Number of extensions: 851336
Number of successful extensions: 1916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1911
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)