Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_B07
(783 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 37 0.016
01_06_0251 - 27885236-27885775,27887383-27887529 33 0.26
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 33 0.34
03_05_0464 - 24585422-24585441,24585585-24585690,24585779-245859... 32 0.59
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 31 1.4
02_02_0632 - 12413660-12413677,12413839-12413870,12414377-124144... 30 1.8
01_03_0089 - 12335195-12335614 30 2.4
12_01_0832 - 7718765-7719088 29 4.2
01_01_0715 - 5542648-5543219,5543352-5543544 29 4.2
11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439,347... 29 5.5
08_02_1355 + 26343939-26345054 29 5.5
02_01_0655 + 4867737-4868642 29 5.5
01_05_0571 + 23353319-23354293,23354431-23354574,23354684-23355052 29 5.5
11_06_0610 - 25449085-25453284 28 7.3
11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138... 28 7.3
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 28 7.3
08_02_0159 + 13403198-13403581 28 7.3
06_01_0290 + 2122758-2123015,2123128-2123544 28 7.3
05_01_0374 + 2924611-2924994 28 7.3
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 28 7.3
11_06_0183 - 20999343-20999865,21000351-21000748 28 9.6
03_05_0333 + 23245139-23245224,23245527-23245633,23246372-23247282 28 9.6
03_03_0200 - 15396187-15396246,15396345-15396566,15396645-153971... 28 9.6
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 580 EATSPVLFLQXG-RGXAPRKRCSTRACAPPCPRCSH 476
E++S V+FL G G P RC PPCP CSH
Sbjct: 2 ESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSH 37
>01_06_0251 - 27885236-27885775,27887383-27887529
Length = 228
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 529 RKRCSTRACAPPCPRCSHCSGGTS--ASAPSGRRGAGSDR 416
R R ++R C P R +H GGTS P+GRR A S R
Sbjct: 187 RGRAASRGCRHPHRREAHGGGGTSPHRQGPAGRRAAASRR 226
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 313 RTVEAIRPVLSDWVNRDRGRLTFRATQVLTGHGCFGRYLHLVARREPTPKCHHCSGCNED 492
+ VE + L+DWV+ + G+ T TG C+G L + R++P+ GC D
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPS-AMDKIKGCVVD 248
Query: 493 TA 498
+A
Sbjct: 249 SA 250
>03_05_0464 -
24585422-24585441,24585585-24585690,24585779-24585926,
24586017-24586144,24586804-24586939,24587711-24587895
Length = 240
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 574 TSPVLFLQXG-RGXAPRKRCSTRACAPPCPRCS 479
+S V+FL G G P RC R APPC CS
Sbjct: 16 SSSVIFLGTGCSGALPDTRCLLRPSAPPCAVCS 48
>02_01_0015 -
98311-98412,98635-98707,98830-98921,99139-99230,
99363-99432,99683-99781,100008-100093,100541-100655,
100853-100918,101064-101143,101226-101301,101915-102151,
102559-102590,102993-103047,103384-103498,104497-104579,
105182-105232,105740-105802,105945-106010,106144-106279,
106503-106591,106844-106964,107138-107340,107434-107820
Length = 862
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +3
Query: 243 ETSISACRARGVVSPPGGPHLRATDCRGDPPGPLGLGESRPRTSHLPSDAGAHGTRLF-- 416
E I+ A SPP LR R P P L S+P + A ++F
Sbjct: 5 EPPITGAGAGAAASPPAPSTLRRNPPRSARPPPTPLPNSKPSQISRLLEEAAERLKVFLR 64
Query: 417 -RSLPAPRRPEGADAEVPPLQ 476
R LP P R A + P Q
Sbjct: 65 IRPLPLPERKGKAKSPTNPKQ 85
>02_02_0632 -
12413660-12413677,12413839-12413870,12414377-12414494,
12414794-12414860,12416098-12416237,12416378-12416470,
12416581-12416643,12418070-12418120,12419508-12419606,
12419876-12420012,12420121-12420219,12420346-12420523
Length = 364
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Frame = +3
Query: 282 SPPGGPHLRATDCRGDPPGPLGLG-----ESRPRTSHLPSDAGAHGTRLFRSLPAPRRPE 446
+PP PH AT C PP P + R R +HL R R++P P RP+
Sbjct: 3 TPPPPPHRGATSCSTRPPPPRAAAAVVAVDRRLRLAHL---------RQCRAVPQPLRPQ 53
Query: 447 GADAE 461
A E
Sbjct: 54 QAQGE 58
>01_03_0089 - 12335195-12335614
Length = 139
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 532 PRKRCSTRACAPPCPRCSHCSGGTSASAPSG-RRGAGSDRNS 410
P R S R+ PP P + +G ++A+ G R+G G RNS
Sbjct: 60 PLHRLSPRSGTPPTPSATSTAGPSAAALSRGQRQGEGWKRNS 101
>12_01_0832 - 7718765-7719088
Length = 107
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = -2
Query: 563 PIFAXRTRRCSAKAVQYASVCSAVSS---LQPLQWWHFGVGSLRATRCR*RPKQPCPVST 393
P+ C + C SS L + +WH+G G A R +P PC + T
Sbjct: 10 PLLLQPLTLCLIGTMAKGKACGETSSPVALDAVPYWHYGEGQGLAKPLRPQPLTPCLIGT 69
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 330 PPGPLGLGESRPRTSHLPSDAGAHGTRLFRSLPAPR-RPEGADAEVPP 470
PP P PR S P AG +GT S P P P G+ PP
Sbjct: 146 PPPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVPAPAPAGSPPPPPP 193
>11_01_0449 -
3473662-3475049,3476026-3476128,3476215-3476439,
3476689-3476856,3477414-3477529,3477640-3477792,
3477879-3478022,3478980-3479583
Length = 966
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 424 YLHLVA--RREPTPKCHHCSGCNEDTAEHTLAYC 519
+L L+A R +P P+C CS C E LA C
Sbjct: 645 FLRLLAKNRLDPAPQCLECSDCGECKNAKNLAGC 678
>08_02_1355 + 26343939-26345054
Length = 371
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 438 DEVQVATETAVSREHLRRSEGETSSVAIHPVRED 337
D+ Q + AV EHL GE +A+HP ED
Sbjct: 278 DDDQWRPKHAVKVEHLAHGGGEVRFLAMHPEEED 311
>02_01_0655 + 4867737-4868642
Length = 301
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 318 CRGDPPGPLG-LGESRPRTSHLPSDAGAHGTRLFRSLPAPRRPEGADA 458
C+ PGP G R SH +G+ G ++FR +P RP G DA
Sbjct: 125 CKRVSPGPGSPTGSERSELSHGGCGSGSGGGQVFRPVP---RPGGFDA 169
>01_05_0571 + 23353319-23354293,23354431-23354574,23354684-23355052
Length = 495
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 505 CAP-PCP-RCSHCSGGTSASAPSGRRGAGSDRNSRVP 401
C P P P SH S +SA G G G DR SR+P
Sbjct: 11 CLPTPAPFSTSHGSLSSSAGGGGGSGGGGDDRISRLP 47
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -3
Query: 583 SEATSPVLFLQXGRGXAPRKRCSTRACAPPCPRCSHCSGGTSAS-APSGRRGAGSDRNSR 407
SEA+SP G +P K +PP P SH S T PS + + + S
Sbjct: 722 SEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSP 781
Query: 406 VP*AP 392
P +P
Sbjct: 782 PPHSP 786
>11_01_0172 -
1383568-1384440,1385336-1385401,1385470-1385505,
1385604-1385743,1386978-1387134,1387245-1387418,
1387540-1387790,1390296-1390446
Length = 615
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 298 GPPGGETTPRAR-HAEIEVSALELPPRLERYPSVTEQVG 185
GPPG E+ + R I VS + PP + P V Q+G
Sbjct: 447 GPPGFESNKKPRLDNPIHVSDMGAPPFFGQVPQVQPQIG 485
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 340 LSDWVNRDRGRLTFRATQVLTGHGCFGR--YLHLVARREPTPKCHHCSGCN 486
LS+W G T+ + +G + Y H P P+C HCS CN
Sbjct: 131 LSEWPGGQHGSTGLPLTKDVLVNGVLVKVKYCHTCMLYRP-PRCSHCSICN 180
>08_02_0159 + 13403198-13403581
Length = 127
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 469 GGTSASAPSGRRGAGSDRNSRVP 401
GG S + GRRG G D +R P
Sbjct: 21 GGESPAVGDGRRGGGDDNGARAP 43
>06_01_0290 + 2122758-2123015,2123128-2123544
Length = 224
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 475 CSGGTSASAPSGRRGAGSDRNSRVP*APASLG 380
CS G+ S+ SG+RG+GS V A +G
Sbjct: 25 CSPGSPVSSGSGKRGSGSGSGDEVDDAGCDVG 56
>05_01_0374 + 2924611-2924994
Length = 127
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 511 RACAPPCPRCSHCSGGTSASAPSGRRGAGSD 419
RA APP P H T+ +A G GAG +
Sbjct: 89 RAAAPPPPNSDHFFWTTAGAASRGGAGAGGE 119
>04_03_0181 - 12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3
Query: 577 ATSPVLFLQXGRGXAPRKRCSTRACAPPCPRCSHCSGGTSASAPSGRRG 431
ATSP G R+ S+ A APP P S + TS S+ S G
Sbjct: 885 ATSPAGVSVTRTGQGMRRSASSPALAPPPPSESGTAAATSTSSSSSGDG 933
>11_06_0183 - 20999343-20999865,21000351-21000748
Length = 306
Score = 27.9 bits (59), Expect = 9.6
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Frame = +3
Query: 246 TSISACRARGVVSPPGGPHLRATDCRG-DPPGPLGLGESRPRTSHLPSDAGA----HGTR 410
TS+ A V G P L + G PP P +PRTS P D+ A G
Sbjct: 32 TSLEQLAASSSVKSSGAPWLGGSGILGPQPPAP-----HQPRTSGAPHDSSAPTTGGGVP 86
Query: 411 LFRSLPAPRRPEGADAEVPPLQWL 482
F L P+ D + PL WL
Sbjct: 87 HFYKLEFPK----FDGKDDPLNWL 106
>03_05_0333 + 23245139-23245224,23245527-23245633,23246372-23247282
Length = 367
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/89 (26%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Frame = +3
Query: 246 TSISACRARGVVSPPGGPHLRATDCRGDP--PGPLGLGESRPRTSHLPSDAGAHGTRLFR 419
TS + C A S PGG R+ PG + G R + DAG R
Sbjct: 83 TSSARCTAAAAASGPGGGSARSAAAAAPTGRPGTVAAGTRRAGKKAV-LDAGGRRVGHLR 141
Query: 420 SLPAPRRPEGADAEVPPLQWLQRGHGGAH 506
L R G+ + L W G H
Sbjct: 142 RLSYGVRERGSGRRLTRLGWCMTEFGVDH 170
>03_03_0200 -
15396187-15396246,15396345-15396566,15396645-15397102,
15397183-15397645
Length = 400
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 547 GRGXAPRKRCSTRACAPPCPRCSHCSGGTSASAPSGRRGAGS 422
G+G R +T A P RC+HC G + P G GA +
Sbjct: 8 GKGGNTRPAATTSA-RPSSSRCAHCGAGLAVPRP-GPGGAAA 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,494,616
Number of Sequences: 37544
Number of extensions: 411759
Number of successful extensions: 1860
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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