BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_FL5_A16
(808 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 35 0.30
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 35 0.30
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 35 0.30
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 35 0.40
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.7
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.7
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.7
AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein. 31 3.7
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.7
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.7
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.7
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.7
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.7
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 31 3.7
AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein. 31 3.7
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 31 4.9
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 31 4.9
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 31 4.9
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 31 6.5
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 31 6.5
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 31 6.5
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 31 6.5
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.30
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKS-PNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 697
PP P L P S P+S QPP P P P+ + PG +PP +++P
Sbjct: 44 PPPPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.30
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKS-PNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 697
PP P L P S P+S QPP P P P+ + PG +PP +++P
Sbjct: 44 PPPPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.30
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKS-PNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 697
PP P L P S P+S QPP P P P+ + PG +PP +++P
Sbjct: 44 PPPPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 34.7 bits (76), Expect = 0.40
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEA--PSAY 706
PP PGD G I P +P PP P P P P +P PPLS +A P
Sbjct: 577 PPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGTAISP--PPPLSGDATIPPPP 634
Query: 707 LTPSSLGMAKXGFAP 751
P +G+ P
Sbjct: 635 PLPEGVGIPSPSSLP 649
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein.
Length = 1494
Score = 31.5 bits (68), Expect = 3.7
Identities = 25/70 (35%), Positives = 29/70 (41%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLT 712
PP+P L P +P S QPP P P P P P L P E S L
Sbjct: 278 PPTPEPLPLSTPSAGTPQS--QPP----PLPPPP-PPAPGSAPPALPPEGPPEDSSQDLA 330
Query: 713 PSSLGMAKXG 742
P+S+G A G
Sbjct: 331 PNSVGAASTG 340
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 596 QPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSL 724
+PP + PFP +P +P FAP L+PP +AP + P L
Sbjct: 85 RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121
>AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein.
Length = 1499
Score = 31.5 bits (68), Expect = 3.7
Identities = 25/70 (35%), Positives = 29/70 (41%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLT 712
PP+P L P +P S QPP P P P P P L P E S L
Sbjct: 283 PPTPEPLPLSTPSAGTPQS--QPP----PLPPPP-PPAPGSAPPALPPEGPPEDSSQDLA 335
Query: 713 PSSLGMAKXG 742
P+S+G A G
Sbjct: 336 PNSVGAASTG 345
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/76 (31%), Positives = 29/76 (38%)
Frame = +2
Query: 524 CIKPPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSA 703
C KPP P L + ++K S PP T S P P AP PP P
Sbjct: 847 CAKPP-PSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAP-QSPPAVKAKPK- 903
Query: 704 YLTPSSLGMAKXGFAP 751
PSS+ + F P
Sbjct: 904 -WQPSSIPVPSPDFPP 918
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/76 (31%), Positives = 29/76 (38%)
Frame = +2
Query: 524 CIKPPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSA 703
C KPP P L + ++K S PP T S P P AP PP P
Sbjct: 847 CAKPP-PSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAP-QSPPAVKAKPK- 903
Query: 704 YLTPSSLGMAKXGFAP 751
PSS+ + F P
Sbjct: 904 -WQPSSIPVPSPDFPP 918
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/76 (31%), Positives = 29/76 (38%)
Frame = +2
Query: 524 CIKPPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSA 703
C KPP P L + ++K S PP T S P P AP PP P
Sbjct: 833 CAKPP-PSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAP-QSPPAVKAKPK- 889
Query: 704 YLTPSSLGMAKXGFAP 751
PSS+ + F P
Sbjct: 890 -WQPSSIPVPSPDFPP 904
>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
Length = 1235
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 581 PNSIHQPPQT*HPFP-SIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSL 724
P+ H P + PFP S+P F P L+PP S P+ + P++L
Sbjct: 420 PHISHHPSAS--PFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 466
>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
protein.
Length = 1259
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 581 PNSIHQPPQT*HPFP-SIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSL 724
P+ H P + PFP S+P F P L+PP S P+ + P++L
Sbjct: 420 PHISHHPSAS--PFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 466
>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
Length = 1011
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 581 PNSIHQPPQT*HPFP-SIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSL 724
P+ H P + PFP S+P F P L+PP S P+ + P++L
Sbjct: 172 PHISHHPSAS--PFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 218
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 581 PNSIHQPPQT*HPFP-SIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSL 724
P+ H P + PFP S+P F P L+PP S P+ + P++L
Sbjct: 451 PHISHHPSAS--PFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 497
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,193,775
Number of Sequences: 237096
Number of extensions: 2622296
Number of successful extensions: 6640
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6639
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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