BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_P21
(747 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF515527-1|AAM61894.1| 211|Anopheles gambiae glutathione S-tran... 24 4.3
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 7.6
>AF515527-1|AAM61894.1| 211|Anopheles gambiae glutathione
S-transferase D10 protein.
Length = 211
Score = 24.2 bits (50), Expect = 4.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 261 QEELPSFLEEGHPSW 305
Q +P+F+E+GH W
Sbjct: 48 QHTIPTFIEDGHVIW 62
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.4 bits (48), Expect = 7.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 393 QDLEDPEVLRPGQCLYQQHEHFQA 464
+D ED + L Q QQH+H QA
Sbjct: 629 EDEEDQQHLLQQQQQQQQHQHHQA 652
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,217
Number of Sequences: 2352
Number of extensions: 10600
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -