BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_P18
(824 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 33 0.008
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 2.1
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 2.8
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 6.5
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 6.5
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 33.5 bits (73), Expect = 0.008
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -2
Query: 637 GXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXGP 497
G GGG GRGG RG G G G G + G G P
Sbjct: 63 GYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGRP 109
Score = 23.8 bits (49), Expect = 6.5
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -2
Query: 628 GGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GG G GG R G G G G G + + GGG
Sbjct: 55 GGYGGGDDGYGGGGR---GGRGGRGGGRGRGRGRGGRDGGG 92
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.4 bits (53), Expect = 2.1
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -2
Query: 655 KKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKR---GGGXG 500
K+ E GGG G GG G G G G + R GGG G
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNG 250
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 25.0 bits (52), Expect = 2.8
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GGG + G GGG G GG R G G G G G GGG
Sbjct: 824 GGGFLITGDPSDTIGAGGG------GAGGPLR---GSSGGAGGGSSGGGGSGGTSGGG 872
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.8 bits (49), Expect = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 770 PPPPPPP 790
PPPPPPP
Sbjct: 530 PPPPPPP 536
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.8 bits (49), Expect = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 770 PPPPPPP 790
PPPPPPP
Sbjct: 783 PPPPPPP 789
Score = 23.8 bits (49), Expect = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 770 PPPPPPP 790
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 23.8 bits (49), Expect = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 770 PPPPPPP 790
PPPPPPP
Sbjct: 785 PPPPPPP 791
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,003
Number of Sequences: 2352
Number of extensions: 6521
Number of successful extensions: 147
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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