BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_P18
(824 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein. 36 0.067
AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-P... 36 0.067
BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p pro... 34 0.27
AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like... 34 0.27
AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA... 34 0.27
AE013599-3129|AAF46672.1| 237|Drosophila melanogaster CG4038-PA... 34 0.27
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 33 0.47
AY075501-1|AAO39496.1| 299|Drosophila melanogaster RE52135p pro... 33 0.47
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 32 0.83
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 32 0.83
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 31 2.5
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 30 3.3
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 30 3.3
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 30 3.3
BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p pro... 29 7.7
AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-P... 29 7.7
>X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein.
Length = 239
Score = 35.9 bits (79), Expect = 0.067
Identities = 22/60 (36%), Positives = 23/60 (38%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG + G GGG GRGG RG G G G G RGGG G
Sbjct: 174 GGGGGFGGRGGRGGGRGGGGRGGGGGRGGGG--FRGGAGRNGGGGGGGGGFNRGRGGGGG 231
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -2
Query: 637 GXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
G GGG G GG G G G G G + GGG G
Sbjct: 8 GGGGGGGRGFGGGGGGRGFGGGGGGRGGGGGRGGGGGFGRGGGGRG 53
>AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-PA
protein.
Length = 98
Score = 35.9 bits (79), Expect = 0.067
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG +K G GGG G GG G G G G K GGG G
Sbjct: 26 GGGGQGGWQKNGGGGGGGGQGGWQKGGGGGGGGKHGGGGGGGGKHGGGNGGGGKHGGGGG 85
Query: 499 PXXXXKKRXG 470
K G
Sbjct: 86 GGGGGGKHGG 95
Score = 32.3 bits (70), Expect = 0.83
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GGG +K G GGG G GG G G G G G GGG
Sbjct: 40 GGGGGQGGWQKGGGGGGGGKHGGGGGGGGKHGGGNGGGGKHGGGGGGGGGGGKHGGGG 97
>BT021407-1|AAX33555.1| 720|Drosophila melanogaster LD06749p
protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.27
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GG KK + GG GRGG R G G G G G RGGG
Sbjct: 621 GGDGGGFKKIGDRKSFGGFDNNQRGGRGGGGRGGGGGFGGRGGGGRGGGGGFGGRGGG 678
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -2
Query: 637 GXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
G G G GRGG R G G G G G + G G G
Sbjct: 649 GGGRGGGGGFGGRGGGGRGGGGGFGGRGGGGRGGGGFGGRGGRGGG 694
>AF162774-1|AAF68853.2| 720|Drosophila melanogaster Nopp140-like
nucleolar protein protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.27
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GG KK + GG GRGG R G G G G G RGGG
Sbjct: 621 GGDGGGFKKIGDRKSFGGFDNNQRGGRGGGGRGGGGGFGGRGGGGRGGGGGFGGRGGG 678
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -2
Query: 637 GXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
G G G GRGG R G G G G G + G G G
Sbjct: 649 GGGRGGGGGFGGRGGGGRGGGGGFGGRGGGGRGGGGFGGRGGRGGG 694
>AE014296-3628|AAF51788.3| 720|Drosophila melanogaster CG7421-PA,
isoform A protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.27
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GG KK + GG GRGG R G G G G G RGGG
Sbjct: 621 GGDGGGFKKIGDRKSFGGFDNNQRGGRGGGGRGGGGGFGGRGGGGRGGGGGFGGRGGG 678
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -2
Query: 637 GXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
G G G GRGG R G G G G G + G G G
Sbjct: 649 GGGRGGGGGFGGRGGGGRGGGGGFGGRGGGGRGGGGFGGRGGRGGG 694
>AE013599-3129|AAF46672.1| 237|Drosophila melanogaster CG4038-PA
protein.
Length = 237
Score = 33.9 bits (74), Expect = 0.27
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG G GGG GRGG RG G G G G + GGG G
Sbjct: 173 GGGGGGGGFGGRGGGRGGGGRGGGGGRGGGG--FRGGAGRNGGGGGGGGFNRGRGGGGGG 230
Score = 33.1 bits (72), Expect = 0.47
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 649 KEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
K G GGG G GG R G G G G G RGGG
Sbjct: 5 KPRGGGGGGGRGFGGGGGGGGRGFGGGGGGRGGGGGRGGGGGFGRGGG 52
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -2
Query: 652 KKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
K G GGG G GG G G G G G + GGG G
Sbjct: 5 KPRGGGGGGGRGFGGGGGGGGRGFGGGGGGRGGGGGRGGGGGFGRGGGGRG 55
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.47
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXX-RXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GGG + + G GGG GRGG R RG G G G G RGGG
Sbjct: 16 GGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFG-GGRGAFGGRGGGGGRGGG 73
Score = 29.1 bits (62), Expect = 7.7
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG + + G GG GRG G G G G G RGGG G
Sbjct: 32 GGGGFGGGRGRGGGGDRGGRGGFGGGRGAFGGRG-GGGGRGGGGRGGGGRGGGGRGGGAG 90
>AY075501-1|AAO39496.1| 299|Drosophila melanogaster RE52135p
protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.47
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 649 KEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
K G GGG G GG R G G G G G RGGG
Sbjct: 5 KPRGGGGGGGRGFGGGGGGGGRGFGGGGGGRGGGGGRGGGGGFGRGGG 52
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -2
Query: 652 KKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
K G GGG G GG G G G G G + GGG G
Sbjct: 5 KPRGGGGGGGRGFGGGGGGGGRGFGGGGGGRGGGGGRGGGGGFGRGGGGRG 55
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 32.3 bits (70), Expect = 0.83
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG + + G GGG GRGG RG G G G G RGGG G
Sbjct: 23 GGGGGGFRGRGGGGGGGGGGFGGGRGRGGGG--DRGGRGGFGGGRGGGG-----RGGGGG 75
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GGG + + G GG GRGG RG G G G G RGGG
Sbjct: 39 GGGGFGGGRGRGGGGDRGGRGGFGGGRGGGG---RGGGGGGGRGAFGGRGGGGGRGGG 93
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXK-XXKRGGGX 503
GGG + G GGG G G RG G G G G + RGGG
Sbjct: 50 GGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGGA 109
Query: 502 G 500
G
Sbjct: 110 G 110
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 32.3 bits (70), Expect = 0.83
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG + + G GGG GRGG RG G G G G RGGG G
Sbjct: 16 GGGGGGFRGRGGGGGGGGGGFGGGRGRGGGG--DRGGRGGFGGGRGGGG-----RGGGGG 68
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGG 506
GGG + + G GG GRGG RG G G G G RGGG
Sbjct: 32 GGGGFGGGRGRGGGGDRGGRGGFGGGRGGGG---RGGGGGGGRGAFGGRGGGGGRGGG 86
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXK-XXKRGGGX 503
GGG + G GGG G G RG G G G G + RGGG
Sbjct: 43 GGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGGA 102
Query: 502 G 500
G
Sbjct: 103 G 103
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = -2
Query: 658 KKKKEXXGXGGGXXXXXXG-RGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
K+ + G GGG G RGG +G G G G RGGG G
Sbjct: 193 KQDMDRQGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGRGGGGG 246
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -2
Query: 655 KKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
+++ GGG GRGG G G G G G GGG G
Sbjct: 204 QRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNG 255
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG + G GG G GG R RG G G G RGGG G
Sbjct: 213 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRY---DRGGGGG 269
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG G GGG G GG R RG G G G GGG G
Sbjct: 216 GGGGGGRGGFGGRRGGGGGG---GGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGG 272
Query: 499 PXXXXKKRXG 470
+ R G
Sbjct: 273 GGGNVQPRDG 282
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -2
Query: 655 KKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
+++ GGG GRGG G G G G G GGG G
Sbjct: 166 QRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNG 217
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG + G GG G GG R RG G G G RGGG G
Sbjct: 175 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRY---DRGGGGG 231
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG G GGG G GG R RG G G G GGG G
Sbjct: 178 GGGGGGRGGFGGRRGGGGGG---GGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGG 234
Query: 499 PXXXXKKRXG 470
+ R G
Sbjct: 235 GGGNVQPRDG 244
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -2
Query: 655 KKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
+++ GGG GRGG G G G G G GGG G
Sbjct: 204 QRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNG 255
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG + G GG G GG R RG G G G RGGG G
Sbjct: 213 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRY---DRGGGGG 269
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG G GGG G GG R RG G G G GGG G
Sbjct: 216 GGGGGGRGGFGGRRGGGGGG---GGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGG 272
Query: 499 PXXXXKKRXG 470
+ R G
Sbjct: 273 GGGNVQPRDG 282
>BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p
protein.
Length = 538
Score = 29.1 bits (62), Expect = 7.7
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG G GGG G G G GAG G RGGG
Sbjct: 231 GGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGA 290
Query: 499 PXXXXKKRXGXF 464
P G F
Sbjct: 291 PGAPGSPGGGGF 302
>AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-PA,
isoform A protein.
Length = 610
Score = 29.1 bits (62), Expect = 7.7
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = -2
Query: 679 GGGXXXXKKKKEXXGXGGGXXXXXXGRGGXXRXXRGXXGXXGAGXXXGXXKXXKRGGGXG 500
GGG G GGG G G G GAG G RGGG
Sbjct: 303 GGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGA 362
Query: 499 PXXXXKKRXGXF 464
P G F
Sbjct: 363 PGAPGSPGGGGF 374
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,174,693
Number of Sequences: 53049
Number of extensions: 593570
Number of successful extensions: 11905
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7384
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -