Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_P17
         (1200 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       30   4.2  
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     29   5.5  
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683...    29   9.6  
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293...    29   9.6  
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060     29   9.6  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 678 PPPPXFXXGGGGGG 637
           PPPP +  GGGGGG
Sbjct: 70  PPPPSYPSGGGGGG 83


>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 18/50 (36%), Positives = 18/50 (36%)
 Frame = -2

Query: 155 KGXPPAPXFXKKRKXPPX*XXGGPPKXGXKXGXKPPXXXXXXFWXPKKGG 6
           K  PP P    K K P       PPK G K   KPP         P K G
Sbjct: 166 KPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPG 215


>06_01_0893 -
           6834350-6834464,6835042-6835218,6835301-6835350,
           6836348-6836416,6836495-6836593,6836681-6836759,
           6837604-6837704,6838645-6838713,6839548-6839588,
           6839793-6841159,6841472-6841575,6841914-6842351,
           6843040-6843567
          Length = 1078

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 696 GGXXXXPPPPXFXXGGGGGG 637
           G     PPPP    GGGGGG
Sbjct: 17  GASSLAPPPPVSKKGGGGGG 36


>04_04_1104 -
           30928475-30928501,30929008-30929110,30929287-30929340,
           30929803-30929895,30930063-30930140,30930416-30930527,
           30930618-30930756,30930823-30930910,30930984-30931079,
           30931675-30931781,30931874-30932009,30932089-30932186,
           30932954-30933047,30933132-30933301,30933749-30933819,
           30936066-30936194,30936552-30936654,30936764-30936907,
           30937123-30937245,30937482-30937563,30939044-30939120,
           30939261-30939315,30939365-30939443,30939544-30939620,
           30939739-30939869,30939947-30940120,30940245-30940310,
           30940937-30941572
          Length = 1113

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 643 PPPPXXKXXGGGGXXXPP 696
           PPPP  +  GGGG   PP
Sbjct: 73  PPPPTSRRGGGGGAALPP 90


>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
          Length = 794

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 678 PPPPXFXXGGGGGG 637
           PPPP F  GGGG G
Sbjct: 14  PPPPPFGRGGGGAG 27


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,172,247
Number of Sequences: 37544
Number of extensions: 351652
Number of successful extensions: 1283
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3666490380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)