Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_P07
(747 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 32 0.42
01_01_0085 - 639959-640192,640290-640379,640465-640521,640826-64... 30 1.7
11_07_0002 - 27171791-27172222 29 3.0
09_02_0279 + 6702517-6702948 29 3.0
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 29 3.9
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458... 29 3.9
07_03_0369 - 17356806-17356934,17357145-17357278,17357989-173582... 29 5.2
01_04_0100 + 16017117-16017196,16017283-16017694 29 5.2
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 28 6.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 6.9
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 28 6.9
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305 28 6.9
01_05_0723 + 24607800-24608357,24609616-24610158,24610281-246106... 28 6.9
12_02_0988 - 25064023-25064327,25064425-25064575,25064995-250652... 28 9.1
05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 28 9.1
04_04_1350 + 32822711-32823063,32823681-32823803,32823890-328239... 28 9.1
02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482... 28 9.1
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1
Query: 402 GSGPAGCSGTPAAPXGRPDGLPCRDG 325
GSG AGC G+ A GR DG RDG
Sbjct: 120 GSGKAGCVGSRADQDGRLDGREVRDG 145
>01_01_0085 -
639959-640192,640290-640379,640465-640521,640826-640858,
640972-641046,641141-641230,641343-641444,641643-641713,
642243-642396,642497-642573,643077-643113
Length = 339
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -2
Query: 320 VSEPSIRLEGSVGWASLG*AAPSGCSVDRGSPPTSSGFWPRRGSDVGCKSAEESFGGWAL 141
VS S EGS + S+ GSP +S+G G+ G ++ FGG L
Sbjct: 269 VSRTSSCREGSGRFQEQRSVVTRTSSIREGSPESSNGASSSTGASTGTNTSTSRFGGLRL 328
Query: 140 KXLG 129
LG
Sbjct: 329 PGLG 332
>11_07_0002 - 27171791-27172222
Length = 143
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = -1
Query: 438 RSTVYRVPTRQXGSGPAGCSGTPAAPXGRPDG----LPCRDGRRF 316
RS+ + + GS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = -1
Query: 438 RSTVYRVPTRQXGSGPAGCSGTPAAPXGRPDG----LPCRDGRRF 316
RS+ + + GS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 122 PRAQGISEPTHQTTPLHSYTRRPIPSEARTRMR*GGYRGQHYN 250
P +P HQ P H Y ++ P GG+RGQ+YN
Sbjct: 816 PHPGHYQQPPHQQPPNHDYGQQAYP---------GGWRGQYYN 849
>03_04_0204 -
18444903-18445054,18445445-18445676,18445765-18445836,
18446201-18446347,18446559-18446614,18446727-18446832,
18446938-18447025,18447112-18447230,18448975-18449580,
18449803-18449898,18450232-18450422,18453287-18453416,
18453531-18453566
Length = 676
Score = 29.1 bits (62), Expect = 3.9
Identities = 31/136 (22%), Positives = 46/136 (33%), Gaps = 7/136 (5%)
Frame = +1
Query: 145 AHPPNDSSA----LLHP-TSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIE 309
+HP N SA HP TS P+ G N LPR P P+ A ++ + ++
Sbjct: 251 SHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPVGGPIVPLRPQMADSSQRGQLVQ 310
Query: 310 GSETSAVSARQPVXXXXXXXXXXXXXXXXXXXXXXXDXIHRRPVAPLTPRPARXSAGSAP 489
G+ TS + H + P T P +A P
Sbjct: 311 GAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFPPTEHTNKIQPATQTPPPAAASKTP 370
Query: 490 RGLTPSG--RPLTFTG 531
+ +G +PL G
Sbjct: 371 QKKASAGQKKPLDALG 386
>07_03_0369 -
17356806-17356934,17357145-17357278,17357989-17358247,
17358322-17358410,17358644-17358794,17358889-17359032,
17359358-17359477,17359595-17359769,17359842-17360215
Length = 524
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 145 AHPPNDSSALLH-PTSDPLRGQNPDEVGGLPRSTLQPDGAA---HPKDAQPTEPSRRIEG 312
A P D S L PT+ L P G LPRS A HP+DA P+ PS R +G
Sbjct: 25 AASPEDGSPFLRLPTASDL----PVPAGQLPRSAAVGLIRALNLHPRDASPS-PSSRGDG 79
Query: 313 SETSAVSARQPV 348
+ +P+
Sbjct: 80 DVPAGTLVERPI 91
>01_04_0100 + 16017117-16017196,16017283-16017694
Length = 163
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 168 RGVVWWVGSEXPWARGL--LTTPCRSLSLTYPARPICAGTS*EVRP 37
RG+VWW G W R + T S T+ A + AG + E RP
Sbjct: 47 RGIVWWRGRRQAWRREAQPMATEAGSARETWAAE-MEAGLAREARP 91
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +1
Query: 157 NDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 297
ND A H D + G+ PD QP A P+D QP PS
Sbjct: 180 NDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPS 223
>08_01_0003 +
30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 163 SSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSARQ 342
SS LLH T L QNPD+ + L + K T+ + +EG ++A+ A +
Sbjct: 645 SSKLLHQTPGNLHSQNPDD--SEKNALLSKSENSKAKTKSGTQITATVEGRISTAMQAER 702
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 185 RPIPSEARTRMR*GGYRGQHYNQTARLTPR 274
R PSE R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
Length = 196
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 224 PTSSGFWPRRGSDVGCKSAE 165
P SSG W RRG +V C++A+
Sbjct: 60 PASSGRWRRRGLEVVCEAAK 79
>01_05_0723 +
24607800-24608357,24609616-24610158,24610281-24610697,
24610804-24611244
Length = 652
Score = 28.3 bits (60), Expect = 6.9
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Frame = +1
Query: 55 GPRANGARGVCETQRSAWCCEQTAGPRXFRAHPPNDSSALLHPTSDPLRGQ---NPDEVG 225
G R A GV E + + PR F P + ALL + LR N +
Sbjct: 450 GQRVLDALGVGEGHVRSVAMHRDIVPRAFSCRYPGHAVALLKRLNGVLRNHPCLNNQRML 509
Query: 226 GLPRST---LQPDGAAHP 270
P T LQPDGAA P
Sbjct: 510 YTPMGTTYILQPDGAASP 527
>12_02_0988 -
25064023-25064327,25064425-25064575,25064995-25065259,
25065640-25065836
Length = 305
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = -2
Query: 563 PRXXVRWAASPPVKVKGRPEGVRPRGALPAL*R-----AGRGVSGATGRRC 426
P R A+SPP + +GR + P G A R +G G + RRC
Sbjct: 17 PAVVSRAASSPPPRSRGRRPSLPPAGCFHAAPRDAALVSGSAAGGVSRRRC 67
>05_01_0442 -
3500849-3500866,3500950-3501027,3501260-3501352,
3501419-3501536,3502815-3502945,3503027-3503299,
3504825-3504882,3505065-3505388,3507404-3507852,
3509514-3509554,3510263-3510412,3510519-3510906
Length = 706
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 402 GSGPAGCSGTPAAPXGRPDGLPCRDG 325
GSG GC G+ A GR G RDG
Sbjct: 215 GSGKGGCVGSRADQDGRIGGREVRDG 240
>04_04_1350 +
32822711-32823063,32823681-32823803,32823890-32823986,
32824135-32824170,32824257-32824444,32824688-32824790,
32824914-32825095,32825184-32825261,32825800-32825902,
32825983-32826019,32826117-32826511
Length = 564
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 83 YVRLNDLHGVVSRPRAQGISEPTHQTTPLHSYTRRPIPSEARTRMR*GGYRGQHYNQTAR 262
YVRL L GVV+ + T+ Y + +P EA + + GY Q + +
Sbjct: 267 YVRLELLEGVVAYHNGNTVKARESLTSAQAKYMQLQVPDEAISILMSMGYGAQAAKRALK 326
Query: 263 LT 268
+T
Sbjct: 327 MT 328
>02_05_0077 +
25645730-25645993,25647172-25647648,25648027-25648237,
25648407-25648564,25648641-25648711,25648829-25648934,
25649008-25649094,25649701-25650252,25650337-25650403,
25650971-25651104,25651175-25651228,25651376-25651472,
25652007-25652212,25652287-25652367,25652543-25652608,
25653025-25653098,25653766-25653871
Length = 936
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 151 PPNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPD 255
PP SDPL+G E G +P S L PD
Sbjct: 508 PPFTQPVAQLSLSDPLQGSPAREEGEVPESELDPD 542
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.131 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,745,019
Number of Sequences: 37544
Number of extensions: 374822
Number of successful extensions: 1192
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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