Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_P07
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70682-4|CAA94581.1|  299|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z68113-3|CAA92150.1|  333|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (...    30   2.0  
Z81050-3|CAB02849.1|  291|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U41624-5|AAF99941.1|  314|Caenorhabditis elegans Collagen protei...    29   2.6  
AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z22177-7|CAA80149.1|  171|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U50191-3|AAK31557.1|  380|Caenorhabditis elegans Dumpy : shorter...    29   4.6  
L12706-1|AAA17398.2|  360|Caenorhabditis elegans collagen protein.     29   4.6  
L11247-3|AAA28008.1|  278|Caenorhabditis elegans Collagen protei...    29   4.6  
AF045640-8|AAC02571.1|  394|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z78541-1|CAB01740.1|  452|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AC006610-7|AAK85451.1|  392|Caenorhabditis elegans Hypothetical ...    28   6.1  
Z74037-4|CAA98490.1|  295|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z70682-4|CAA94581.1|  299|Caenorhabditis elegans Hypothetical
           protein F08G5.4 protein.
          Length = 299

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 399 SGPAGCSGTPAAPXGRPDGLPCRDG 325
           +GPAG  G P AP   PDG P +DG
Sbjct: 144 AGPAGPDGAPGAPG--PDGQPGQDG 166


>Z68113-3|CAA92150.1|  333|Caenorhabditis elegans Hypothetical
           protein E03G2.4 protein.
          Length = 333

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -1

Query: 402 GSGPAGCSGTPAAPXGRP--DGLPCRDG 325
           G G  GC  +P  P GRP  DG P  DG
Sbjct: 135 GGGCCGCGQSPPGPPGRPGSDGSPGSDG 162


>AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (grd
           related) protein 5 protein.
          Length = 220

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -1

Query: 402 GSGPAGCSGTPAAPXGRPDGLPCRDGRRFRAFDSP 298
           G    GCS  PA P   P   PC  G   RA+ +P
Sbjct: 21  GGSSCGCSAPPACPPPPPPS-PCGGGGYARAYSAP 54


>Z81050-3|CAB02849.1|  291|Caenorhabditis elegans Hypothetical
           protein C50B6.4 protein.
          Length = 291

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = -1

Query: 399 SGPAGCSGTPAAP--XGRPDGLPCRDGRR 319
           +GPAG +G P AP   G+P G P +DG+R
Sbjct: 171 AGPAGDAGAPGAPGQDGQP-GAPGQDGQR 198


>U41624-5|AAF99941.1|  314|Caenorhabditis elegans Collagen protein
           174 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 402 GSGPAGCSGTPAAPXGRPDGLPCRDG 325
           G G  GC G   +P G P G+P RDG
Sbjct: 113 GGGGGGCCGCGVSPQG-PPGVPGRDG 137


>AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical
           protein Y2H9A.3 protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -1

Query: 399 SGPAGCSGTPAAP--XGRPDGLPCRDGRR 319
           +GPAG +G P AP   G+P G P +DG R
Sbjct: 171 AGPAGDAGAPGAPGQDGQP-GAPGQDGHR 198


>Z22177-7|CAA80149.1|  171|Caenorhabditis elegans Hypothetical
           protein ZK512.8 protein.
          Length = 171

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 166 SALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVS 333
           S  L   S+P   +  DE+  L R  +  D   HP + +  +P  + E S TSA S
Sbjct: 46  STHLSLASNPTEFKFMDEIALLKRGRIDKDAPKHPYNRRGQQPMMKKEISVTSAHS 101


>U50191-3|AAK31557.1|  380|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 2 protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -1

Query: 396 GPAGCSGTPAAPXG-RPDGLPCRDG 325
           GP+G SG PA P    PDG P R G
Sbjct: 126 GPSGDSGLPALPGAPGPDGAPGRPG 150


>L12706-1|AAA17398.2|  360|Caenorhabditis elegans collagen protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -1

Query: 396 GPAGCSGTPAAPXG-RPDGLPCRDG 325
           GP+G SG PA P    PDG P R G
Sbjct: 126 GPSGDSGLPALPGAPGPDGAPGRPG 150


>L11247-3|AAA28008.1|  278|Caenorhabditis elegans Collagen protein
           91 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = -1

Query: 396 GPAGCSGTPAAPXGRP--DGLPCRDGRR 319
           GPAG +G P AP G P  DG P ++G+R
Sbjct: 173 GPAGDAGAPGAP-GAPGNDGQPGQNGQR 199


>AF045640-8|AAC02571.1|  394|Caenorhabditis elegans Hypothetical
           protein C11D2.2 protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = -2

Query: 329 TADVSEPSIRLEGSVGWASLG*AAPSGCS-VDRGSPPTSSGFWPRRGSDVGCKSAEESFG 153
           T  +    I+ E S G+ + G   P  C  +    P T + +W  R   +G  +  E   
Sbjct: 214 TVYLEHHGIKKEASGGYFTYGGEDPDHCGEIITWIPLTKAAYWQFRMQGIGIDNVNEHKN 273

Query: 152 GW 147
           GW
Sbjct: 274 GW 275


>Z78541-1|CAB01740.1|  452|Caenorhabditis elegans Hypothetical
           protein F19D8.1 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -1

Query: 189 GRRV*ECRGVVWWVGSEXPWARGLLTTPCRSLSLT 85
           GR+V   +G+  W+G       GL++T CR + ++
Sbjct: 317 GRQVTNVKGITVWLGGRRLSMGGLISTVCRRVGMS 351


>AC006610-7|AAK85451.1|  392|Caenorhabditis elegans Hypothetical
           protein C30F12.5 protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 154 PNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHP 270
           P D   + HP   PL   +P   G +PR+ L P+GA  P
Sbjct: 317 PIDEPRIGHPLYSPLPPIDPT-YGTIPRARLAPNGAPPP 354


>Z74037-4|CAA98490.1|  295|Caenorhabditis elegans Hypothetical
           protein F57B7.3 protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -1

Query: 435 STVYRVPTRQXGSGPAGCSGTPAAPXGRPDGLPCRDG 325
           ST   +P      GP G  G P AP   P G P +DG
Sbjct: 128 STSECIPCPAGAPGPQGPDGAPGAPG--PSGQPGQDG 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.311    0.131    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,825,809
Number of Sequences: 27780
Number of extensions: 252534
Number of successful extensions: 996
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)