Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_P05
         (804 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   8.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.3  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   8.3  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 716 TXSXPTGIQTXRGXPQAPNRXRKTGQXG 799
           T + P G +  RG P  P R  + GQ G
Sbjct: 299 TTTGPKGEKGDRGEPGEPGRSGEKGQAG 326


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/47 (25%), Positives = 15/47 (31%)
 Frame = +3

Query: 597 RXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPGPPXXXKLXPXPQG 737
           +  P P       P  ++  P     PR    PG P    L   P G
Sbjct: 61  KIAPNPFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNG 107


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 148 ITQFDVGARNSLXTTSVPGGVLCSV 74
           ++ +DV  + S  TT+   G +C+V
Sbjct: 629 VSDYDVYGKGSTSTTTSSAGTICTV 653


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 148 ITQFDVGARNSLXTTSVPGGVLCSV 74
           ++ +DV  + S  TT+   G +C+V
Sbjct: 630 VSDYDVYGKGSTSTTTSSAGTICTV 654


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,130
Number of Sequences: 2352
Number of extensions: 13556
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)