Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_P05
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.24
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.24
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.24
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 32 0.55
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 32 0.55
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 32 0.55
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 32 0.55
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.2
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 5.1
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 6.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 6.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 6.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 9.0
U23514-1|AAC46543.1| 817|Caenorhabditis elegans Hypothetical pr... 28 9.0
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPT--PXXTKKXXPXXT-LXLPPSXAXPRXXPX---PGPPXXX 713
G P R GSP PT P K+ P PP+ + P P PG
Sbjct: 419 GSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 478
Query: 714 KLXPXPQGSKRXXAXXRPPTGXGKPG 791
+ P+G +R PPTG G
Sbjct: 479 ESREGPRGPRRSPPTGSPPTGSPPTG 504
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 11/91 (12%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPG----------- 698
G P R P +P P P PP PR P G
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Query: 699 PPXXXKLXPXPQGSKRXXAXXRPPTGXGKPG 791
PP P P KR PPTG G
Sbjct: 322 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTG 352
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPT--PXXTKKXXPXXT-LXLPPSXAXPRXXPX---PGPPXXX 713
G P R GSP PT P K+ P PP+ + P P PG
Sbjct: 440 GSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 499
Query: 714 KLXPXPQGSKRXXAXXRPPTGXGKPG 791
+ P+G +R PPTG G
Sbjct: 500 ESREGPRGPRRSPPTGSPPTGSPPTG 525
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 11/91 (12%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPG----------- 698
G P R P +P P P PP PR P G
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Query: 699 PPXXXKLXPXPQGSKRXXAXXRPPTGXGKPG 791
PP P P KR PPTG G
Sbjct: 343 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTG 373
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPT--PXXTKKXXPXXT-LXLPPSXAXPRXXPX---PGPPXXX 713
G P R GSP PT P K+ P PP+ + P P PG
Sbjct: 425 GSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESS 484
Query: 714 KLXPXPQGSKRXXAXXRPPTGXGKPG 791
+ P+G +R PPTG G
Sbjct: 485 ESREGPRGPRRSPPTGSPPTGSPPTG 510
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 11/91 (12%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPG----------- 698
G P R P +P P P PP PR P G
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Query: 699 PPXXXKLXPXPQGSKRXXAXXRPPTGXGKPG 791
PP P P KR PPTG G
Sbjct: 328 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTG 358
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 81 HN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNRFXRSPRSKWASTSRLAF 245
HN +P G EV + N VI+GPSE CTC + +F S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 81 HN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNRFXRSPRSKWASTSRLAF 245
HN +P G EV + N VI+GPSE CTC + +F S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 81 HN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNRFXRSPRSKWASTSRLAF 245
HN +P G EV + N VI+GPSE CTC + +F S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 81 HN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNRFXRSPRSKWASTSRLAF 245
HN +P G EV + N VI+GPSE CTC + +F S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 606 PTPXXTKKXXPXXTLXLPPSXAXPRXXPXPGPPXXXKLXPXPQGSK 743
PTP T + P + + P P PGPP + P P S+
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 606 PTPXXTKKXXPXXTLXLPPSXAXPRXXPXPGPPXXXKLXPXPQGSK 743
PTP T + P + + P P PGPP + P P S+
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +3
Query: 657 PPSXAXPRXXPXPGPPXXXKLXPXPQGSKRXXAXXRPPTGXG 782
PP+ A P P P P + P P A P G G
Sbjct: 42 PPADAAPAPAPEPAPAPAPEAVPAPAADAGGYAAAAAPAGGG 83
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/69 (26%), Positives = 23/69 (33%)
Frame = +3
Query: 564 KARAXFGSPMNRXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPGPPXXXKLXPXPQGSK 743
KA+ G N+ P P L + P P PP L P P G +
Sbjct: 483 KAQYPTGVFFNQPLPPPPAHPPKIGAHPLVMGGGGGVPMIPMVPMPPGMIGLPPGPPGRR 542
Query: 744 RXXAXXRPP 770
R +PP
Sbjct: 543 RKSRFDQPP 551
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/80 (26%), Positives = 23/80 (28%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPGPPXXXKLXPXP 731
G P K G P P P + PP P P P P P P
Sbjct: 111 GSPGKPGKP-GKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGP 169
Query: 732 QGSKRXXAXXRPPTGXGKPG 791
G+ A P G PG
Sbjct: 170 DGNPGSPAGPSGPGPAGPPG 189
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/80 (26%), Positives = 23/80 (28%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPGPPXXXKLXPXP 731
G P K G P P P + PP P P P P P P
Sbjct: 111 GSPGKPGKP-GKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGP 169
Query: 732 QGSKRXXAXXRPPTGXGKPG 791
G+ A P G PG
Sbjct: 170 DGNPGSPAGPSGPGPAGPPG 189
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/80 (26%), Positives = 23/80 (28%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPGPPXXXKLXPXP 731
G P K G P P P + PP P P P P P P
Sbjct: 111 GSPGKPGKP-GKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGP 169
Query: 732 QGSKRXXAXXRPPTGXGKPG 791
G+ A P G PG
Sbjct: 170 DGNPGSPAGPSGPGPAGPPG 189
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/80 (26%), Positives = 23/80 (28%)
Frame = +3
Query: 552 GDPSKARAXFGSPMNRXTPTPXXTKKXXPXXTLXLPPSXAXPRXXPXPGPPXXXKLXPXP 731
G P K G P P P + PP P P P P P P
Sbjct: 111 GSPGKPGKP-GKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGP 169
Query: 732 QGSKRXXAXXRPPTGXGKPG 791
G+ A P G PG
Sbjct: 170 DGNPGSPAGPSGPGPAGPPG 189
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 657 PPSXAXPRXXPXPGPPXXXKLXPXPQGSKRXXAXXRPPTGXGKPG 791
PP P P P P K P PQG P G PG
Sbjct: 151 PPCQKCPPGPPGPAGPPGPKGLPGPQGDAGTSGQDGVPGLPGPPG 195
>U23514-1|AAC46543.1| 817|Caenorhabditis elegans Hypothetical
protein F48E8.6 protein.
Length = 817
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 95 RNGSRXQTIPSPDIELSYIRTFGAVMHVLRKKPF 196
RN + + S ++ S + T GA++H+L KK F
Sbjct: 144 RNEIQDNGVTSDEVPDSCLITIGAIVHILEKKHF 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,364,064
Number of Sequences: 27780
Number of extensions: 315181
Number of successful extensions: 907
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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