Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_P04
(831 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.15
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 31 0.15
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.81
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 5.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 22 6.6
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/63 (26%), Positives = 20/63 (31%)
Frame = +3
Query: 633 PXPHXNPNAXTXXPPPXXPTPXAPEXPXXPXXPNTXKPTXPXXPXXRRPPXXXPPKTXHP 812
P P P + PPP P P P P+ P P P PP P
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP---PPLSQAPVANTS 215
Query: 813 AXP 821
+ P
Sbjct: 216 SRP 218
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/60 (25%), Positives = 17/60 (28%)
Frame = +3
Query: 633 PXPHXNPNAXTXXPPPXXPTPXAPEXPXXPXXPNTXKPTXPXXPXXRRPPXXXPPKTXHP 812
P P P + PP P P P P + P P PPK P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = +3
Query: 675 PPXXPTPXAPEXPXXPXXPNTXKPTXPXXPXXRRPP 782
PP P P P+ P +P+ P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.5 bits (68), Expect = 0.15
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +3
Query: 651 PNAXTXXPPPXXPTPXAPEXPXXPXXPNTXKPTXPXXPXXRRPPXXXPPKTXHPAXP 821
P T PP P P P P P + P P P PP P +PA P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVP--PGMALPPGMPAPFPGYPAVP 546
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.81
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXPTPXAPEXPXXPXXPNTXKPTXPXXPXXRRPPXXXPPKTXHP 812
P P P P P PT P P PP PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 651 PNAXTXXPPPXX-PTPXAPEXPXXPXXPNTXKPTXPXXPXXRRPPXXXPPKT 803
P T P P P P AP P PN P+ ++PP P T
Sbjct: 1463 PGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSM-IPSVAQQPPSSVAPAT 1513
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = +3
Query: 675 PPXXPTPXAP---EXPXXPXXPNTXKPTXPXXPXXRRPPXXXPPKTXHPAXP 821
PP P AP P P P + P P PP PP + P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +3
Query: 663 TXXPPPXXPTPXAPEXPXXPXXPNTXKPTXPXXP 764
T PP PTP P P ++ P+ P P
Sbjct: 728 TPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.3
Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +3
Query: 657 AXTXXPPPXXPTPXAPEXPXXPXXPNTXKPT--XPXXPXXRRPPXXXPPKTXHPAXP 821
A + PP P+ AP P P KP+ P P P P P P
Sbjct: 1116 APSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/62 (25%), Positives = 18/62 (29%), Gaps = 2/62 (3%)
Frame = +3
Query: 651 PNAXTXXPPPXXPTPXAPEXPXXPXXPNTXKPT--XPXXPXXRRPPXXXPPKTXHPAXPX 824
P + PP P P P P KP+ P P P P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 825 TT 830
T
Sbjct: 1232 PT 1233
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/55 (25%), Positives = 19/55 (34%)
Frame = +3
Query: 633 PXPHXNPNAXTXXPPPXXPTPXAPEXPXXPXXPNTXKPTXPXXPXXRRPPXXXPP 797
P P + A + PP P+ P P P P+ P +P PP
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPS--GIPPVPKPSVAAPP 1103
Score = 25.4 bits (53), Expect = 10.0
Identities = 15/59 (25%), Positives = 17/59 (28%), Gaps = 2/59 (3%)
Frame = +3
Query: 651 PNAXTXXPPPXXPTPXAPEXPXXPXXPNTXKPT--XPXXPXXRRPPXXXPPKTXHPAXP 821
P PP P+ P P P KP+ P P P P P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +3
Query: 672 PPPXX--PTPXAPEXPXXPXXPNTXKPTXPXXPXXRRPPXXXPPKTXHPA 815
PPP PTP P P P P P P PP PA
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.2 bits (45), Expect(2) = 6.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 468 PXPXXPPPPXP 500
P P PPPP P
Sbjct: 234 PLPAPPPPPPP 244
Score = 21.8 bits (44), Expect(2) = 6.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 459 DXGPXPXXPPPP 494
D P P PPPP
Sbjct: 186 DYNPPPPPPPPP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.130 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,292,832
Number of Sequences: 5004
Number of extensions: 12781
Number of successful extensions: 66
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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