Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_P03
(987 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 34 0.70
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 34 0.70
AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrom... 34 0.70
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 34 0.70
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 33 1.6
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 33 2.1
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 32 3.7
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 32 3.7
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 3.7
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 32 3.7
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 3.7
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 3.7
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 3.7
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 4.9
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 4.9
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 4.9
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 4.9
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 6.5
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 6.5
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 6.5
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 6.5
Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for ... 31 8.6
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 8.6
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 8.6
L20686-1|AAA91852.1| 572|Homo sapiens guanine nucleotide releas... 31 8.6
L13858-1|AAA35914.1| 1332|Homo sapiens guanine nucleotide exchan... 31 8.6
CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein. 31 8.6
BC117261-1|AAI17262.1| 1332|Homo sapiens son of sevenless homolo... 31 8.6
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 8.6
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 8.6
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 8.6
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 31 8.6
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXN 967
PPP+ P P+ P A PPP P R PP N
Sbjct: 285 PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN 328
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXN 967
PPP+ P P+ P A PPP P R PP N
Sbjct: 285 PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN 328
>AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrome
protein interacting protein protein.
Length = 312
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXN 967
PPP+ P P+ P A PPP P R PP N
Sbjct: 94 PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN 137
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 34.3 bits (75), Expect = 0.70
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXN 967
PPP+ P P+ P A PPP P R PP N
Sbjct: 285 PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN 328
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 33.1 bits (72), Expect = 1.6
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNPXK 976
PPP + P P P A P PPP P P P P +
Sbjct: 77 PPPPQQPPPPPPPPSPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPR 123
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 821 RXXXXPPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
R PPP P P P P PP P H PPP P
Sbjct: 953 RAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPP 1002
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 487 RRXXXPXPPPXXXER-PAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
RR P PPP R P+P PR PP R PS PP
Sbjct: 545 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR--RTPSPPP 586
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 487 RRXXXPXPPPXXXERPAPXRKPRXXHRXPP 576
RR P PPP P+P K R H PP
Sbjct: 612 RRTASPPPPPKRRASPSPPPKRRVSHSPPP 641
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 487 RRXXXPXPPPXXXER-PAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
RR P PPP R P+P PR PP R PS PP
Sbjct: 545 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR--RTPSPPP 586
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 487 RRXXXPXPPPXXXERPAPXRKPRXXHRXPP 576
RR P PPP P+P K R H PP
Sbjct: 612 RRTASPPPPPKRRASPSPPPKRRVSHSPPP 641
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 487 RRXXXPXPPPXXXER-PAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
RR P PPP R P+P PR PP R PS PP
Sbjct: 554 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR--RTPSPPP 595
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 487 RRXXXPXPPPXXXERPAPXRKPRXXHRXPP 576
RR P PPP P+P K R H PP
Sbjct: 621 RRTASPPPPPKRRASPSPPPKRRVSHSPPP 650
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 487 RRXXXPXPPPXXXER-PAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
RR P PPP R P+P PR PP R PS PP
Sbjct: 545 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR--RTPSPPP 586
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 487 RRXXXPXPPPXXXERPAPXRKPRXXHRXPP 576
RR P PPP P+P K R H PP
Sbjct: 612 RRTASPPPPPKRRASPSPPPKRRVSHSPPP 641
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 487 RRXXXPXPPPXXXER-PAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
RR P PPP R P+P PR PP R PS PP
Sbjct: 554 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR--RTPSPPP 595
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 487 RRXXXPXPPPXXXERPAPXRKPRXXHRXPP 576
RR P PPP P+P K R H PP
Sbjct: 621 RRTASPPPPPKRRASPSPPPKRRVSHSPPP 650
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 487 RRXXXPXPPPXXXER-PAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
RR P PPP R P+P PR PP R PS PP
Sbjct: 543 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR--RTPSPPP 584
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 487 RRXXXPXPPPXXXERPAPXRKPRXXHRXPP 576
RR P PPP P+P K R H PP
Sbjct: 610 RRTASPPPPPKRRASPSPPPKRRVSHSPPP 639
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 487 RRXXXPXPPPXXXER-PAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
RR P PPP R P+P PR PP R PS PP
Sbjct: 543 RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR--RTPSPPP 584
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 487 RRXXXPXPPPXXXERPAPXRKPRXXHRXPP 576
RR P PPP P+P K R H PP
Sbjct: 610 RRTASPPPPPKRRASPSPPPKRRVSHSPPP 639
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 490 RXXXPXPPPXXXERPAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
R P PPP P P P PPP R P PP
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPP 314
Score = 31.1 bits (67), Expect = 6.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P P R A PPP P RA PPP P
Sbjct: 292 PPPHSSGPPPPPARGRGA------PPPPPSRAPTAAPPPPPPSRP 330
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 490 RXXXPXPPPXXXERPAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
R P PPP P P P PPP R P PP
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPP 314
Score = 31.1 bits (67), Expect = 6.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P P R A PPP P RA PPP P
Sbjct: 292 PPPHNSGPPPPPARGRGA------PPPPPSRAPTAAPPPPPPSRP 330
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 490 RXXXPXPPPXXXERPAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
R P PPP P P P PPP R P PP
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPP 314
Score = 31.1 bits (67), Expect = 6.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P P R A PPP P RA PPP P
Sbjct: 292 PPPHNSGPPPPPARGRGA------PPPPPSRAPTAAPPPPPPSRP 330
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 490 RXXXPXPPPXXXERPAPXRKPRXXHRXPPPXXRXDXXPSTPP 615
R P PPP P P P PPP R P PP
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPP 314
Score = 31.1 bits (67), Expect = 6.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P P R A PPP P RA PPP P
Sbjct: 292 PPPHNSGPPPPPARGRGA------PPPPPSRAPTAAPPPPPPSRP 330
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPP 955
PPP + P + P P PPP P PPP
Sbjct: 63 PPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP 102
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPP 955
PPP + P + P P PPP P PPP
Sbjct: 63 PPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP 102
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPP 955
PPP + P + P P PPP P PPP
Sbjct: 63 PPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP 102
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPP 955
PPP + P + P P PPP P PPP
Sbjct: 63 PPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP 102
>Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for
acrosin (EC 3.4.21.10). ).
Length = 421
Score = 30.7 bits (66), Expect = 8.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 837 RPPKKXPXPXQTXAXPXPXTPQXPPP 914
RPP P P A P P P PPP
Sbjct: 345 RPPPSPPPPPPPPASPLPPPPPPPPP 370
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P + P P PPP P PPP+ P
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P + P P PPP P PPP+ P
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317
>L20686-1|AAA91852.1| 572|Homo sapiens guanine nucleotide releasing
factor protein.
Length = 572
Score = 30.7 bits (66), Expect = 8.6
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNPXKH 979
PP K P P P PPP P R PPP P +H
Sbjct: 458 PPKVKPRVPVPTGAFDG---PLHSPPPPPPRDPLPDTPPPVPLRPPEH 502
>L13858-1|AAA35914.1| 1332|Homo sapiens guanine nucleotide exchange
factor protein.
Length = 1332
Score = 30.7 bits (66), Expect = 8.6
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNPXKH 979
PP K P P P PPP P R PPP P +H
Sbjct: 1182 PPKVKPRVPVPTGAFDG---PLHSPPPPPPRDPLPDTPPPVPLRPPEH 1226
>CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein.
Length = 421
Score = 30.7 bits (66), Expect = 8.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 837 RPPKKXPXPXQTXAXPXPXTPQXPPP 914
RPP P P A P P P PPP
Sbjct: 345 RPPPSPPPPPPPPASPLPPPPPPPPP 370
>BC117261-1|AAI17262.1| 1332|Homo sapiens son of sevenless homolog 2
(Drosophila) protein.
Length = 1332
Score = 30.7 bits (66), Expect = 8.6
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNPXKH 979
PP K P P P PPP P R PPP P +H
Sbjct: 1182 PPKVKPRVPVPTGAFDG---PLHSPPPPPPRDPLPDTPPPVPLRPPEH 1226
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P + P P PPP P PPP+ P
Sbjct: 200 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 244
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P + P P PPP P PPP+ P
Sbjct: 310 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 354
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P + P P PPP P PPP+ P
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXP-XRAXAXHXPPPK 958
PPP P P+ + P PPP P H PPP+
Sbjct: 954 PPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPR 995
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.136 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,437,387
Number of Sequences: 237096
Number of extensions: 1346565
Number of successful extensions: 12986
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10970
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13213860436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -