Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_P03
(987 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 38 0.008
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.55
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.55
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.72
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 0.96
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.9
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 30 2.9
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 3.9
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 5.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.9
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNPXK 976
PPP P P + P A P PPP P A A P PK +P K
Sbjct: 64 PPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAPA-QAPAPKYPSPGK 109
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP + P P+ + PPP P A PPP P
Sbjct: 468 PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP + P P+ + PPP P A PPP P
Sbjct: 475 PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.72
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 561 PPTXAPPXPXXPPXKHPXXPP 623
PPT PP P PP + P PP
Sbjct: 252 PPTRRPPGPPGPPTRRPPGPP 272
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.5 bits (68), Expect = 0.96
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -1
Query: 969 GFXXFGGGXXXAXARXGXGGGXFXGXXAXGXRXFGLGXXXFSGGG 835
G +GGG G GGG G G G G F GGG
Sbjct: 148 GMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGG 192
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -1
Query: 969 GFXXFGGGXXXAXARXGXGGGXFXGXXAXGXRXFGLGXXXFSGGG 835
G GGG G GGG F G G G+G + GGG
Sbjct: 166 GGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGG-GMGGGGYGGGG 209
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 969 GFXXFGGGXXXAXARXGXGGGXFXGXXAXGXRXFGLGXXXFSGGG 835
G +GGG G GGG + G G +G+G GGG
Sbjct: 115 GGGGYGGGGDGGGGYGGYGGGGYGGMGG-GPGGYGMGGYGGGGGG 158
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 840 PPKKXPXPXQTXAXPXPXTPQXPPPXNXXXXXPXT 944
P K P P T A P P T PPP P T
Sbjct: 178 PTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTT 212
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 840 PPKKXPXPXQTXAXPXPXTPQXPPPXNXXXXXPXT 944
P + P P T A P P T PPP P T
Sbjct: 170 PTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTT 204
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP + P P P PP P RA + PPP +P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPPPPPPRGSP 307
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P P P PPP P PPP+ +P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSPPPPRAGSP 297
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP + P P P PP P RA + PPP +P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPPPPPPRGSP 328
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P P P PPP P PPP+ +P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSPPPPRAGSP 318
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP + P P P PP P RA + PPP +P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPPPPPPRGSP 313
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
PPP P P P PPP P PPP+ +P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSPPPPRAGSP 303
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 860 PXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPP 955
P PN P P PPP P A PPP
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 581 WGGGXRWXXRGFRXGAGRSXXWGGGXG 501
WGG W G R GR WGG G
Sbjct: 58 WGGRGGWGRGGGRGYGGRGGGWGGRGG 84
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -1
Query: 954 GGGXXXAXARXGXGGGXFXGXXAXGXRXFGL--GXXXFSGGG 835
GGG R G GGG F G G R G G F GGG
Sbjct: 8 GGGGGFRGGRGGGGGGGFRGGRG-GDRGGGFRGGRGGFGGGG 48
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNP 970
P P + P P R P P P P P R PPP P
Sbjct: 540 PSPVREPTPPPPPREPTPREPT--PEPEPVREPTPPPPPPAKPRP 582
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 546 ETXXXPPTXAPPXPXXPPXKHPXXPP 623
E PP +PP P PP P PP
Sbjct: 344 EITEIPPIISPPAPPPPPPPPPPPPP 369
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPP 955
PPP P P P P PPP + PPP
Sbjct: 719 PPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPP 758
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 836 PPPEKXXXPXPNXRXPXAXXPXXXPPPXPXRAXAXHXPPPKXXNPXK 976
PPP P R P P PP P R P P+ NP +
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRP-PMTPPSPQRRPPRTPPSPEPRNPPR 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.136 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,791,196
Number of Sequences: 27780
Number of extensions: 158884
Number of successful extensions: 1655
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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