Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_O21
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.27
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 32 0.46
12_01_0943 - 9324181-9325095,9326671-9326853 30 1.9
11_04_0183 + 14642037-14642069,14642099-14642220,14642791-146429... 30 1.9
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 29 3.3
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 29 4.3
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 29 5.7
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 29 5.7
06_03_0790 - 24636805-24637770 29 5.7
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 29 5.7
05_01_0521 + 4500268-4500283,4500364-4500680,4500999-4501094,450... 29 5.7
03_05_0630 + 26260159-26260272,26260520-26260894 29 5.7
08_02_0713 + 20335317-20335916,20336029-20336071,20336278-20336342 28 7.6
08_02_0332 + 15857514-15858113,15858226-15858268,15858474-15858538 28 7.6
07_03_0421 - 18011768-18011832,18012039-18012081,18012194-18012784 28 7.6
06_03_0464 + 21043706-21044305,21044418-21044460,21047402-21047421 28 7.6
06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,150... 28 7.6
02_04_0400 - 22608519-22608844,22609044-22609122 28 7.6
10_08_0214 - 15915156-15915713 28 10.0
07_01_0907 - 7636725-7637681 28 10.0
06_02_0175 - 12624608-12625297 28 10.0
03_05_0292 + 22846273-22846377,22847161-22847823 28 10.0
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 28 10.0
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 457 PGGGGXRGXXGXRXXRXPGGRGGG 386
PGGGG G G R PGG GGG
Sbjct: 92 PGGGGAPGPLGGGGARPPGGGGGG 115
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -2
Query: 457 PGGGGXRGXXGXRXXRXPGGRGGGXAXG 374
PGGGG G G R PGG GGG G
Sbjct: 173 PGGGGGGGGPG----RAPGGGGGGGGPG 196
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -2
Query: 457 PGGGGXRGXXGXRXXRXPGGRGGGXAXG 374
PGGGG G G R PGG GGG G
Sbjct: 186 PGGGGGGGGPG----RAPGGGGGGGGLG 209
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 32.3 bits (70), Expect = 0.46
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGG 386
GGGG RG G R GGRGGG
Sbjct: 101 GGGGGRGGGGGGGGRGGGGRGGG 123
>12_01_0943 - 9324181-9325095,9326671-9326853
Length = 365
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 463 WXPGGGGXRGXXGXRXXRXPGGRGGG 386
W GGGG RG R R G GGG
Sbjct: 16 WTGGGGGGRGRRRCRTRRHDGSDGGG 41
>11_04_0183 +
14642037-14642069,14642099-14642220,14642791-14642974,
14643148-14643348
Length = 179
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXGXXXA 362
GG G RG G R GGRGG + G A
Sbjct: 56 GGDGRRGGSGGRPSARSGGRGGSGSGGGPRA 86
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGG 386
GGGG RG G R GG GGG
Sbjct: 7 GGGGRRGGRGGGGGREGGGGGGG 29
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 496 RXSXXGRTXXXWXPGGGGXRGXXGXRXXRXPGGRGGG 386
R G W GGGG G G R GGRGGG
Sbjct: 63 RGRGGGAGGGGWGRGGGGGGGAGGYRGG---GGRGGG 96
>10_08_0343 -
16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXA 380
GGGG RG G + GRGGG A
Sbjct: 851 GGGGRRGGGGGPNSQRGRGRGGGGA 875
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G R GGRGGG G
Sbjct: 237 GGGGGGSVGGSRQGFGAGGRGGGGGGG 263
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 463 WXPGGGGXRGXXGXRXXRXPGGRGGGXAXG 374
W GGGG G G GG GGG G
Sbjct: 80 WSGGGGGGGGGGGGGGGGGGGGGGGGGGGG 109
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G G GGRGGG G
Sbjct: 102 GGGGGGGGGGGGGGGGGGGRGGGGGGG 128
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G G R GG GGG G
Sbjct: 107 GGGGGGGGGGGGGGRGGGGGGGGGGGG 133
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G G R GG GGG G
Sbjct: 110 GGGGGGGGGGGRGGGGGGGGGGGGGGG 136
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG RG G GG GGG G
Sbjct: 116 GGGGGRGGGGGGGGGGGGGGGGGGGGG 142
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G G GGRGGG + G
Sbjct: 558 GGGGGGGYSGGGGGYSGGGRGGGYSRG 584
>05_01_0521 +
4500268-4500283,4500364-4500680,4500999-4501094,
4501219-4501296,4501333-4501557,4502842-4502910,
4502946-4503200
Length = 351
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGG-RGGGXAXG 374
GG G RG G R R GG RGGG G
Sbjct: 37 GGRGGRGGRGGRTPRGRGGGRGGGGRGG 64
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G G R GG GGG G
Sbjct: 108 GGGGYGGGGGGGYGRREGGYGGGGGYG 134
>08_02_0713 + 20335317-20335916,20336029-20336071,20336278-20336342
Length = 235
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGG 386
GGGG G G R GG GGG
Sbjct: 74 GGGGGGGDGGGEDGRDGGGEGGG 96
>08_02_0332 + 15857514-15858113,15858226-15858268,15858474-15858538
Length = 235
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGG 386
GGGG G G R GG GGG
Sbjct: 74 GGGGGGGDGGREDGRDGGGEGGG 96
>07_03_0421 - 18011768-18011832,18012039-18012081,18012194-18012784
Length = 232
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGG 386
GGGG G G R GG GGG
Sbjct: 74 GGGGGGGDGGGEDGRDGGGEGGG 96
>06_03_0464 + 21043706-21044305,21044418-21044460,21047402-21047421
Length = 220
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGG 386
GGGG G G R GG GGG
Sbjct: 74 GGGGGGGDGGGEDGRDGGGEGGG 96
>06_01_0194 +
1503350-1503554,1504399-1504490,1504835-1504935,
1506186-1506276,1506616-1506674,1506764-1506884,
1506959-1507027,1507321-1507373,1507688-1507796,
1507895-1508065,1508148-1508306,1508561-1508650,
1508751-1508933,1509837-1510027,1510340-1510787
Length = 713
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG RG G GG GGG G
Sbjct: 674 GGGGGRGRGGGGGGGRGGGGGGGGGRG 700
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G G GGRGGG G
Sbjct: 45 GGGGGGGGGGGGGGGGGGGRGGGGGGG 71
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G G R GG GGG G
Sbjct: 50 GGGGGGGGGGGGGGRGGGGGGGGGGGG 76
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG G G R GG GGG G
Sbjct: 53 GGGGGGGGGGGRGGGGGGGGGGGGGGG 79
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXAXG 374
GGGG RG G GG GGG G
Sbjct: 59 GGGGGRGGGGGGGGGGGGGGGGGGGGG 85
>10_08_0214 - 15915156-15915713
Length = 185
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 478 RTXXXWXPGGGGXRGXXGXRXXRXPGGRGGGXAXG 374
RT + PGGGG G G GG G G G
Sbjct: 24 RTLLGYGPGGGGGGGGGGEGGGGGYGGSGYGSGSG 58
>07_01_0907 - 7636725-7637681
Length = 318
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 463 WXPGGGGXRGXXGXRXXRXPGGRGGG 386
W GGG G G PGG GGG
Sbjct: 277 WGGGGGHRGGGDGAGGSAAPGGGGGG 302
>06_02_0175 - 12624608-12625297
Length = 229
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 454 GGGGXRGXXGXRXXRXPGGRGGGXA 380
GGGG G G R R G GGG A
Sbjct: 146 GGGGGEGRKGIRTEREREGVGGGGA 170
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 451 GGGXRGXXGXRXXRXPGGRGGGXA 380
GGG RG G R GGR GG A
Sbjct: 74 GGGGRGARGGGGARGGGGRHGGEA 97
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 233 HHALCSHDHSGSGVRSQVLERLEMRLRSGGGGAR 334
H A C+ D G GVR + + RLR+G G+R
Sbjct: 1373 HEAHCAQDRRGDGVRPRQIR----RLRAGEAGSR 1402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,156,603
Number of Sequences: 37544
Number of extensions: 211992
Number of successful extensions: 1818
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -