Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_O19
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 39 0.003
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 39 0.003
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.35
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 31 0.61
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.81
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.81
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.81
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 31 1.1
AC006685-6|AAK84576.1| 65|Caenorhabditis elegans Hypothetical ... 31 1.1
U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical pr... 30 1.9
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 2.5
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.3
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.3
AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical ... 29 4.3
AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical ... 29 4.3
U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical p... 28 5.7
AF143149-1|AAD37915.1| 260|Caenorhabditis elegans R151.8B prote... 28 5.7
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 28 5.7
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.6
U97401-1|AAB52466.2| 336|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 28 7.6
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +1
Query: 196 KFSSRQTRPA*RLPTKPQ--RAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTS 369
K + + A R P+ PQ +APP++ + P A AP A PPQ Y G P G
Sbjct: 580 KMDTSEAATAARPPSTPQAPQAPPVQAAPAPVQAPQAPQA-----PPQAYQGYGGPGGPP 634
Query: 370 SPSHLHDS*GAHQSHSAPPPHRTLVPSTGRPRTQQSTAPAGAGWG 504
++ + Q PPP + + ++Q P G G G
Sbjct: 635 QQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQG 679
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +1
Query: 196 KFSSRQTRPA*RLPTKPQ--RAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTS 369
K + + A R P+ PQ +APP++ + P A AP A PPQ Y G P G
Sbjct: 580 KMDTSEAATAARPPSTPQAPQAPPVQAAPAPVQAPQAPQA-----PPQAYQGYGGPGGPP 634
Query: 370 SPSHLHDS*GAHQSHSAPPPHRTLVPSTGRPRTQQSTAPAGAGWG 504
++ + Q PPP + + ++Q P G G G
Sbjct: 635 QQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQG 679
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +1
Query: 214 TRPA*RLPTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLP-PGTSSPSHLHD 390
TRPA P R P SG P A P P Y P P SPS+
Sbjct: 332 TRPA-PASQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSP 390
Query: 391 S*GAHQSHSAPPPHRTLVPSTG 456
S A ++S PPP + PS G
Sbjct: 391 SYPAEPAYSVPPPAKPEQPSGG 412
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/80 (31%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 414
P K PP +G+P A R PP G PP T P L G
Sbjct: 36 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRR 95
Query: 415 SAPPPHRTLV---PSTGRPR 465
PPP T P TG P+
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQ 115
Score = 31.9 bits (69), Expect = 0.47
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 267 AERRPRYRHVRAIGPPSPAPTPMLR-WAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLS 443
A RRP + G P+P PT + +G P P+ G+P P T PQDLS
Sbjct: 216 ASRRPP-PPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGT-GSPPPPPTGEPQDLS 273
Query: 444 AE---HRAPPHP 470
E R PP P
Sbjct: 274 GEGNASRRPPPP 285
Score = 31.5 bits (68), Expect = 0.61
Identities = 25/80 (31%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 414
P K PP +G+P A R PP G PP T P L G
Sbjct: 192 PPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGE-GNASRR 250
Query: 415 SAPPPHRT---LVPSTGRPR 465
PPP T P TG P+
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQ 270
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +3
Query: 267 AERRPRYRHVRAIGPPSPAPTPMLR-WAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLS 443
A RRP + G P P PT + +G P P+ G+P P T PQDLS
Sbjct: 92 ASRRPP-PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGT-GSPPPPPTGEPQDLS 149
Query: 444 AE---HRAPPHP 470
E R PP P
Sbjct: 150 GEGNASRRPPPP 161
Score = 31.1 bits (67), Expect = 0.81
Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 414
P K +PP +G+P A R PP G PP T P L + G
Sbjct: 161 PPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDL-SAEGYASRR 219
Query: 415 SAPPPHRT---LVPSTGRPR 465
PPP T P TG P+
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQ 239
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/74 (40%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 267 AERRPRYRHVRAIGPPSPAPT--PM-LRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQD 437
A RRP + G P P PT P L G+A+ P P G P P T PQD
Sbjct: 154 ASRRPP-PPPKGTGSPPPPPTGEPQDLSTEGNASRRPPP---PPKGTGTPPPPPTGEPQD 209
Query: 438 LSAE---HRAPPHP 470
LSAE R PP P
Sbjct: 210 LSAEGYASRRPPPP 223
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 414
P K +PP +G+P A R PP G PP T P L G
Sbjct: 130 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTE-GNASRR 188
Query: 415 SAPPPHRTLV---PSTGRPR 465
PPP T P TG P+
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQ 208
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 414
PT P P LSG+ + P PP G PP T P L S + S
Sbjct: 230 PTPPPTGEPQDLSGEGNASRRPP-------PPPKGTGSPPPPPTGEPQDL--SGEGNASR 280
Query: 415 SAPPPHR---TLVPSTGRP 462
PPP + T P TG P
Sbjct: 281 RPPPPPKGTGTPPPPTGEP 299
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/80 (31%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 414
P K PP +G+P A R PP G PP T P L G
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGE-GNASRR 157
Query: 415 SAPPPHRT---LVPSTGRPR 465
PPP T P TG P+
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQ 177
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 267 AERRPRYRHVRAIGPPSPAPTPMLR-WAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLS 443
A RRP + G P P PT + + P P+ G+P P T PQDLS
Sbjct: 185 ASRRPP-PPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGT-GSPTPPPTGEPQDLS 242
Query: 444 AE---HRAPPHP 470
E R PP P
Sbjct: 243 GEGNASRRPPPP 254
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 352 LPPGTSSPSHLHDS*GAHQSHSAPPPHRTLVPSTGRPRTQQSTAPAGA 495
+PPGTS+PS + H PP ++ S+G P + + A A
Sbjct: 83 MPPGTSTPSLSSAENSGNGPHPPAPPPQSSAESSGLPSSSEQEEEASA 130
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 0.81
Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCA---P*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAH 405
P P+ +PPL SG P A P R PP PP SP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG---- 295
Query: 406 QSHSAPPPHRTLVPSTGRPRTQQSTAPAGAGWG 504
S PPP R P+ P Q +P AG G
Sbjct: 296 -SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 327
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 0.81
Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCA---P*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAH 405
P P+ +PPL SG P A P R PP PP SP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG---- 316
Query: 406 QSHSAPPPHRTLVPSTGRPRTQQSTAPAGAGWG 504
S PPP R P+ P Q +P AG G
Sbjct: 317 -SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 348
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.81
Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 PTKPQRAPPLRLSGDPGTAMCA---P*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAH 405
P P+ +PPL SG P A P R PP PP SP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG---- 301
Query: 406 QSHSAPPPHRTLVPSTGRPRTQQSTAPAGAGWG 504
S PPP R P+ P Q +P AG G
Sbjct: 302 -SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 333
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 291 HVRAIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTT 425
H A+ PSP TP+LR +G+ ++ P+ ++ + ++TT
Sbjct: 94 HALALDGPSPTMTPILRSSGTKNHNYAPIHQSAILLPQYQSRKTT 138
>AC006685-6|AAK84576.1| 65|Caenorhabditis elegans Hypothetical
protein T13G4.7 protein.
Length = 65
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 312 PSPAPTPMLRWAGSATGDFFPLSSPRLV---RGAPEPQRTTTPQDLSAEHRAPPHPAIDG 482
P PA P G+ S P V R P+ R T+ + S + PPHP +G
Sbjct: 2 PPPAKKPCAPANGNNMNPSMTSSQPANVERSREIPQTGRLTSANEASQQQNVPPHP--NG 59
Query: 483 PCRS 494
CR+
Sbjct: 60 NCRA 63
>U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical
protein C49H3.6b protein.
Length = 498
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +3
Query: 300 AIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQ 434
A+ PAP P+ R SAT FP RL R P T P+
Sbjct: 351 AVNRQQPAPPPVARLPNSAT---FPTEKSRLPRAPPPAVTTPVPR 392
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +3
Query: 300 AIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQ 434
A+ PAP P+ R SAT FP RL R P T P+
Sbjct: 351 AVNRQQPAPPPVARLPNSAT---FPTEKSRLPRAPPPAVTTPVPR 392
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +1
Query: 325 PPQCYVGRDLPPGTSSPSHLHDS*GAHQS--HSAPPPHRTLVPSTGRPRTQQSTAPA 489
PP PPG PS L GA H + PPHR + RPR + P+
Sbjct: 60 PPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRPS 116
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +1
Query: 256 PPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSHSAPPPHR 435
PP+++SG P + + P P TSS + H+ G +Q H +P P
Sbjct: 40 PPIQISGKPASTAKPTSGSPQHHPQPIEQATTNPSVTSSLINQHNRVGNNQGHRSPSPTS 99
Query: 436 TLVPSTGRPRT 468
+ S+ P T
Sbjct: 100 SPQLSSPPPST 110
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Frame = +1
Query: 316 RRLPPQCYVGRDLPPG---TSSPSHLHDS*GAHQSHSAPPPHRTLVPSTGRPRTQQSTAP 486
R PP + G PPG P H P PHR G PR Q AP
Sbjct: 111 RGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRPQAPAAP 170
Query: 487 AGAGWGLSARTXRSAFTA 540
SA+ + F A
Sbjct: 171 PPKSLFPSAQKPKPLFAA 188
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 709 APPXXFQTEXXFGETTIPMTSSXRRAQGXPGAL*KTGHADEP 584
AP +QTE E + T+S RR Q P + H DEP
Sbjct: 270 APRASYQTEQYARERSSSTTTSSRRRQVSPDRSEQRRHRDEP 311
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 709 APPXXFQTEXXFGETTIPMTSSXRRAQGXPGAL*KTGHADEP 584
AP +QTE E + T+S RR Q P + H DEP
Sbjct: 378 APRASYQTEQYARERSSSTTTSSRRRQVSPDRSEQRRHRDEP 419
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -2
Query: 711 RPHPXXSKPXPXSXKRRFR*RPASVGHKEXPGLYEKPGMPMNPRRXS*GGGS*P 550
RPHP P P R A + + PG PGM P GGG P
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -2
Query: 711 RPHPXXSKPXPXSXKRRFR*RPASVGHKEXPGLYEKPGMPMNPRRXS*GGGS*P 550
RPHP P P R A + + PG PGM P GGG P
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -2
Query: 711 RPHPXXSKPXPXSXKRRFR*RPASVGHKEXPGLYEKPGMPMNPRRXS*GGGS*P 550
RPHP P P R A + + PG PGM P GGG P
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -2
Query: 711 RPHPXXSKPXPXSXKRRFR*RPASVGHKEXPGLYEKPGMPMNPRRXS*GGGS*P 550
RPHP P P R A + + PG PGM P GGG P
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
>AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical
protein F48A11.5a protein.
Length = 632
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 124 TSSSFFHRRRGVRHNPVRPPS 62
+SS+ F RRG R NPV PP+
Sbjct: 162 SSSASFSSRRGTRANPVPPPN 182
>AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical
protein F48A11.5b protein.
Length = 627
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 124 TSSSFFHRRRGVRHNPVRPPS 62
+SS+ F RRG R NPV PP+
Sbjct: 157 SSSASFSSRRGTRANPVPPPN 177
>U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical
protein R151.8 protein.
Length = 731
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 166 DYAFRKARWAKFSSRQTRPA*RLPTKPQRA---PPLRLSGDPGTAMCAP 303
D+A + A K + ++T PA R PT P A P L + PG + AP
Sbjct: 487 DFACQLAFLKKTTRKKTAPAKRKPTNPVLATVTPQLLIRPPPGESSSAP 535
>AF143149-1|AAD37915.1| 260|Caenorhabditis elegans R151.8B protein
protein.
Length = 260
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 166 DYAFRKARWAKFSSRQTRPA*RLPTKPQRA---PPLRLSGDPGTAMCAP 303
D+A + A K + ++T PA R PT P A P L + PG + AP
Sbjct: 16 DFACQLAFLKKTTRKKTAPAKRKPTNPVLATVTPQLLIRPPPGESSSAP 64
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 163 GDYAFRKARWAKFSSRQTRPA*RLPTKPQRAPPLRLSGDPG 285
GDYA K +W+ FS +Q+ TK Q+A P G+PG
Sbjct: 601 GDYAIIKGKWSGFSRKQS------ATKGQKAKP----GNPG 631
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 469 GCGGARCSALRSCGVVVRCG 410
GC GA C A +CG CG
Sbjct: 758 GCDGAACGACGACGACGACG 777
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 469 GCGGARCSALRSCGVVVRCGSGAPLTSRGDER-GKKSPVADPAQRNIGVGAGEGGP 305
G G G + C +GAP + G + P P Q +G G G GP
Sbjct: 113 GANGVTIGLTGGNGPCITCPAGAPGPAGAPGAPGPQGPSGAPGQDAVGEGPGPAGP 168
>U97401-1|AAB52466.2| 336|Caenorhabditis elegans Hypothetical
protein F21A9.2 protein.
Length = 336
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 417 RTTTPQDLSAEHRAPPHPAIDGPC 488
RT+TP DLS+ AP P++ C
Sbjct: 182 RTSTPLDLSSSPHAPSVPSLSASC 205
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 398 PHES-WR*EGEE-VPGGRSRPT*HWGGSRRRRAYGAHMAVPGSPLSRSGGARWGLVGSR* 225
P+E+ WR EG E PG SR + G R G + + + G + G+VG
Sbjct: 854 PNEAPWRIEGREPAPGWPSRGVVKFDGYSTRYREGLDLVLHDISADVAAGEKIGIVGRTG 913
Query: 224 AGR 216
AG+
Sbjct: 914 AGK 916
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,442,745
Number of Sequences: 27780
Number of extensions: 381566
Number of successful extensions: 1444
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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