Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_O13
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152... 32 0.53
01_06_0295 + 28276505-28276576,28276682-28276888,28277492-282777... 31 0.70
03_02_0644 + 10118790-10119559,10120252-10120432,10120526-101207... 30 2.1
08_02_1296 - 25951758-25951983,25952134-25952159,25952626-259527... 29 2.8
07_03_1731 - 29102403-29102720,29103529-29103735,29103937-291052... 29 2.8
07_03_1280 + 25434933-25436153 29 2.8
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 29 3.7
02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856 29 3.7
12_02_0900 - 24153734-24153943,24154461-24155110,24155198-241553... 28 6.5
07_02_0009 - 11716174-11716435,11716837-11717459,11718385-117184... 28 6.5
06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312 28 6.5
06_03_1150 + 28022633-28023374,28023501-28023565 28 6.5
05_05_0262 - 23666184-23666262,23666564-23667759 28 8.6
05_05_0255 + 23643568-23644761 28 8.6
04_01_0006 - 112476-114182,114627-114676,115289-115463 28 8.6
02_01_0382 - 2772378-2773544 28 8.6
01_06_0649 + 30861946-30862179,30862702-30862824,30863104-308631... 28 8.6
>11_06_0645 -
25814302-25814759,25814853-25815005,25815032-25815214,
25815342-25815531,25815624-25815784,25816136-25816623,
25817035-25817075
Length = 557
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 240 GVRRGSGRWRTAQGTPPYSAGTSLVATGFGYF 335
G RRG+GRWR A+G+ Y GT ++ YF
Sbjct: 523 GGRRGTGRWRRAEGSGDY--GTDNISNTSTYF 552
>01_06_0295 +
28276505-28276576,28276682-28276888,28277492-28277740,
28277928-28278080,28278158-28278313,28278411-28278570,
28278664-28278815,28278906-28278993,28279111-28279223,
28279271-28279345,28279435-28279669,28279760-28280148
Length = 682
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 477 PQQKKPTLDDDDFPSLSMGRDDHP-NIGASSVQPPKVTMINSQEMQALKNNQTQSQPKKS 301
P KP L P SMG + ++G +++QPPK +++S+ ++A K + S
Sbjct: 496 PSPSKP-LSTKKAPRHSMGGANRRLSLGGATMQPPKTDILHSKSVRAAKKTEEIGTLSPS 554
Query: 300 QRSME 286
R ++
Sbjct: 555 SRGLD 559
>03_02_0644 +
10118790-10119559,10120252-10120432,10120526-10120725,
10120834-10120992,10122375-10122741
Length = 558
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 328 PNPVATKEVPAEYGGVPCAVRHRPLPRRTPAVD 230
PN + T E YGG+ CA+ P+ RT ++D
Sbjct: 433 PNHI-TPEAWGNYGGIKCAMETLPITNRTTSLD 464
>08_02_1296 -
25951758-25951983,25952134-25952159,25952626-25952710,
25952828-25952959,25953037-25953180,25953254-25953312,
25953381-25953687,25954211-25954292,25954369-25954502,
25954587-25954680,25954751-25954874,25955136-25955195
Length = 490
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -2
Query: 429 SMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQTQSQPKKSQRSMEAFPALSAT---A 259
S D HP S+QPP+ T+ N+ Q + + + Q +K + PA++ T A
Sbjct: 287 SSKEDQHPTT-PPSLQPPETTLDNNTVNQIIPSAKRALQFEKELHIDQPSPAIANTIQVA 345
Query: 258 HSPAAPPQWITVSKGK 211
+ PQ + +SK K
Sbjct: 346 TNQLYHPQQVDLSKEK 361
>07_03_1731 -
29102403-29102720,29103529-29103735,29103937-29105210,
29105298-29105734,29106370-29106764,29106921-29107051,
29109034-29109052
Length = 926
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 468 KKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQTQSQPKKSQRSM 289
K P+ DD ++ D +S+ P + S+ + NN+ S PK+ +RSM
Sbjct: 85 KTPSDDDSRIKKKALDGGDSNGSSSSASNSPVTKVCRSKSRRRNLNNEEPSNPKQLRRSM 144
>07_03_1280 + 25434933-25436153
Length = 406
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 227 VIHCGGAAGEWAVADSAGNASILRWDFFGCDW 322
V+ CGG A +++ G AS+ W+F G W
Sbjct: 293 VVACGGRAYVVVLSELLGTASLRLWEFAGGAW 324
>08_02_1508 + 27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 29.1 bits (62), Expect = 3.7
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Frame = -2
Query: 552 QXHSQPASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPK 373
Q SQ S+F T+ N IS Q T+ D P + +D P + SV +
Sbjct: 976 QMPSQAPLPSSFS-TRNKENGISEAGQTN--TVAPDGLPGPGVPKDAGPQVAGPSVVKSQ 1032
Query: 372 VTMINSQE----MQALKNNQTQSQPKKSQRSMEAFPAL 271
M + Q L N+Q +SQP++++ A AL
Sbjct: 1033 KNMNEAYNDGPSTQQLPNDQYRSQPREAKEEQGADAAL 1070
>02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856
Length = 299
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/94 (23%), Positives = 33/94 (35%)
Frame = -2
Query: 492 RISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQTQSQ 313
R S P K+P D + S G + V + +Q +QA+ NNQ
Sbjct: 173 RKSTRPPGKRPKPDPEATTSEPWGLSNEETETPDLTTLAGVMVTQTQLLQAIANNQGNRG 232
Query: 312 PKKSQRSMEAFPALSATAHSPAAPPQWITVSKGK 211
+ P ATA P W+ + + K
Sbjct: 233 GSSFGEFVRTKPPTFATAEEPMDAEDWLRIIEKK 266
>12_02_0900 -
24153734-24153943,24154461-24155110,24155198-24155334,
24156595-24157223
Length = 541
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 273 AQGTPPYSAGTSLVATGFGYFLTLAFLD 356
A G PP+S + TG G+ +++AFLD
Sbjct: 76 ASGIPPFSWRKLWLFTGPGFLMSIAFLD 103
>07_02_0009 -
11716174-11716435,11716837-11717459,11718385-11718469,
11719346-11719374
Length = 332
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 420 RDDHPNIGASSVQPPKVTMINSQEMQALKNNQTQSQPKKSQRS--MEAFPALSATAHSPA 247
+D HP + + + + EM+ N+ P + +EA PA +ATA +P
Sbjct: 258 KDSHPELARQTT----AQLTHPSEMRDENENKETPFPAVVMEAPKVEATPAAAATAPAPP 313
Query: 246 APP 238
APP
Sbjct: 314 APP 316
>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
Length = 270
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 635 LPXPXNAPRRXPXXPPPSSGIXSLAFRFXYTANP 534
LP P AP P PPSSG AF F + ++P
Sbjct: 107 LPLPFPAPAS-PGGAPPSSGSGFPAFPFPFPSSP 139
>06_03_1150 + 28022633-28023374,28023501-28023565
Length = 268
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 635 LPXPXNAPRRXPXXPPPSSGIXSLAFRFXYTANP 534
LP P AP P PPSSG AF F + ++P
Sbjct: 107 LPLPFPAPAS-PGGAPPSSGSGFPAFPFPFPSSP 139
>05_05_0262 - 23666184-23666262,23666564-23667759
Length = 424
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -3
Query: 698 LPXEID*RAMTRISRXWREGALPXPXNAPRRXP 600
LP +D R M R+ WR P P P P
Sbjct: 20 LPCLVDRRRMARVCHNWRVAVAPQPQPPPGTRP 52
>05_05_0255 + 23643568-23644761
Length = 397
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -3
Query: 698 LPXEID*RAMTRISRXWREGALPXPXNAPRRXP 600
LP +D R M R+ WR P P P P
Sbjct: 20 LPCLVDRRRMARVCHDWRVAVAPQPQPPPGTRP 52
>04_01_0006 - 112476-114182,114627-114676,115289-115463
Length = 643
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 219 WKR*STAGVRRGSGRWRTAQGTPPYSAGTSLVAT 320
W+R +AG RRG T GTP G L T
Sbjct: 577 WRRGQSAGRRRGGESEETPVGTPRARGGEPLTPT 610
>02_01_0382 - 2772378-2773544
Length = 388
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = -3
Query: 632 PXPXNAPRRXPXXPPPSSGIXSLAFRFXYTANPQAXVILG*PRPAETASQYHHNRRSQLS 453
P P PR P S S A R + P+A PA A HH R +S
Sbjct: 15 PSPSRLPRSASGKAPTSPPSSSNASRRHHQQPPRASA----STPATPAPSRHHLRSLSIS 70
Query: 452 TMTI 441
MTI
Sbjct: 71 CMTI 74
>01_06_0649 +
30861946-30862179,30862702-30862824,30863104-30863197,
30863819-30863901,30863984-30864073,30864176-30864562,
30864903-30864991,30867801-30867907,30868431-30868822
Length = 532
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 437 GKSSSSRVGFFCCGGIEMRFP 499
G SSS +GF CC +M+FP
Sbjct: 456 GGSSSPTIGFRCCRVSQMKFP 476
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,817,366
Number of Sequences: 37544
Number of extensions: 364505
Number of successful extensions: 1340
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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